253409

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type III Classification (family/domain) cptIN/-
Location 6549601..6550193 Replicon chromosome
Accession NZ_CP102274
Organism Hungatella hathewayi strain DSM 13479

Toxin (Protein)


Gene name cptN Uniprot ID A0A174X7X3
Locus tag NQ487_RS29905 Protein ID WP_055651970.1
Coordinates 6549708..6550193 (+) Length 162 a.a.

Antitoxin (RNA)


Gene name cptI
Locus tag -
Coordinates 6549601..6549647 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NQ487_RS29890 (6544916) 6544916..6545872 - 957 WP_006774117.1 ABC transporter permease -
NQ487_RS29895 (6546191) 6546191..6548797 - 2607 WP_006774114.1 cation-translocating P-type ATPase -
NQ487_RS29900 (6548958) 6548958..6549440 + 483 WP_118041670.1 S-ribosylhomocysteine lyase -
- (6549601) 6549601..6549647 + 47 NuclAT_0 - Antitoxin
- (6549601) 6549601..6549647 + 47 NuclAT_0 - Antitoxin
NQ487_RS29905 (6549708) 6549708..6550193 + 486 WP_055651970.1 hypothetical protein Toxin
NQ487_RS29910 (6550257) 6550257..6552128 - 1872 WP_259952372.1 alpha amylase C-terminal domain-containing protein -
NQ487_RS29915 (6552220) 6552220..6554073 - 1854 WP_118076947.1 ABC-F family ATP-binding cassette domain-containing protein -
NQ487_RS29920 (6554148) 6554148..6554903 - 756 WP_006774874.1 exodeoxyribonuclease III -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 162 a.a.        Molecular weight: 19009.00 Da        Isoelectric Point: 8.9750

>T253409 WP_055651970.1 NZ_CP102274:6549708-6550193 [Hungatella hathewayi]
MDKGHFYYINDQYFIDFPDTMLMKNKETISGQPHDRPCFYAFEDQRTGLYWLIPFSSQVAKYRRYYNTKLQKYKCCDTIT
FGEVLGREKAFLIQNMCPVTNYYIKNEYIDSVSNIPVQVNGAFERELLQKAKRVLALQRKGIKLILPDVLSIEAQLLNKH
P

Download         Length: 486 bp

Antitoxin


Download         Length: 47 bp

>AT253409 NZ_CP102274:6549601-6549647 [Hungatella hathewayi]
CAAATGTTTGTCGCTACTCGATATGCGACTCATCAAAAGGTCGAGTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A174X7X3

Antitoxin

Download structure file

References