Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/RelE(toxin) |
Location | 1417097..1417580 | Replicon | chromosome |
Accession | NZ_CP102137 | ||
Organism | Streptococcus suis strain M104300_S20 |
Toxin (Protein)
Gene name | relE | Uniprot ID | D5AIX4 |
Locus tag | NQZ96_RS06900 | Protein ID | WP_012027435.1 |
Coordinates | 1417097..1417357 (-) | Length | 87 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | A0A0Z8BIX7 |
Locus tag | NQZ96_RS06905 | Protein ID | WP_012775256.1 |
Coordinates | 1417359..1417580 (-) | Length | 74 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NQZ96_RS06875 (NQZ96_06875) | 1412482..1413711 | - | 1230 | WP_012775253.1 | tetratricopeptide repeat protein | - |
NQZ96_RS06880 (NQZ96_06880) | 1413701..1414867 | - | 1167 | WP_012775254.1 | AI-2E family transporter | - |
NQZ96_RS06885 (NQZ96_06885) | 1415003..1416007 | + | 1005 | WP_012028380.1 | lactonase family protein | - |
NQZ96_RS06890 (NQZ96_06890) | 1416071..1416256 | + | 186 | WP_002935693.1 | hypothetical protein | - |
NQZ96_RS06895 (NQZ96_06895) | 1416289..1416930 | - | 642 | WP_012775255.1 | HAD family hydrolase | - |
NQZ96_RS06900 (NQZ96_06900) | 1417097..1417357 | - | 261 | WP_012027435.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
NQZ96_RS06905 (NQZ96_06905) | 1417359..1417580 | - | 222 | WP_012775256.1 | DUF6290 family protein | Antitoxin |
NQZ96_RS06910 (NQZ96_06910) | 1417976..1419283 | - | 1308 | WP_002935704.1 | phosphopyruvate hydratase | - |
NQZ96_RS06915 (NQZ96_06915) | 1419433..1419885 | + | 453 | WP_012028381.1 | DUF1694 domain-containing protein | - |
NQZ96_RS06920 (NQZ96_06920) | 1419951..1420121 | - | 171 | WP_014636067.1 | hypothetical protein | - |
NQZ96_RS06925 (NQZ96_06925) | 1420112..1421239 | - | 1128 | WP_012028382.1 | glycerate kinase | - |
NQZ96_RS06930 (NQZ96_06930) | 1421347..1421997 | + | 651 | WP_012027441.1 | HAD family hydrolase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
flank | IS/Tn | - | - | 1422434..1423636 | 1202 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A2K1T1M7 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0Z8BIX7 |