253178

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 1027009..1027171 Replicon chromosome
Accession NZ_CP102089
Organism Staphylococcus capitis subsp. capitis strain H17

Toxin (Protein)


Gene name SprA2 Uniprot ID A0A507SQ11
Locus tag NF392_RS04930 Protein ID WP_030063529.1
Coordinates 1027009..1027113 (+) Length 35 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 1027141..1027171 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NF392_RS04920 1022941..1025880 + 2940 WP_049326519.1 AAA family ATPase -
NF392_RS04925 1025877..1026818 + 942 WP_002434737.1 3'-5' exoribonuclease YhaM -
NF392_RS04930 1027009..1027113 + 105 WP_030063529.1 type I toxin-antitoxin system Fst family toxin Toxin
- 1027141..1027171 + 31 - - Antitoxin
NF392_RS04935 1027268..1028269 - 1002 WP_023350053.1 peptidylprolyl isomerase -
NF392_RS04940 1028471..1029040 - 570 WP_002434864.1 DUF3267 domain-containing protein -
NF392_RS04945 1029232..1029603 - 372 WP_002434824.1 YtxH domain-containing protein -
NF392_RS04950 1029681..1030106 - 426 WP_002434751.1 HIT family protein -
NF392_RS04955 1030239..1030979 + 741 WP_002453567.1 ABC transporter ATP-binding protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 35 a.a.        Molecular weight: 3963.74 Da        Isoelectric Point: 10.7588

>T253178 WP_030063529.1 NZ_CP102089:1027009-1027113 [Staphylococcus capitis subsp. capitis]
MLFDIFVHIMATATSGCIVALFAHWLRTRNDKRK

Download         Length: 105 bp

Antitoxin


Download         Length: 31 bp

>AT253178 NZ_CP102089:1027141-1027171 [Staphylococcus capitis subsp. capitis]
AAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A507SQ11

Antitoxin

Download structure file

References