Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 1027009..1027171 Replicon chromosome
Accession NZ_CP102089
Organism Staphylococcus capitis subsp. capitis strain H17

Toxin (Protein)


Gene name SprA2 Uniprot ID A0A507SQ11
Locus tag NF392_RS04930 Protein ID WP_030063529.1
Coordinates 1027009..1027113 (+) Length 35 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 1027141..1027171 (+)

Genomic Context


NF392_RS04920NF392_RS04925NF392_RS04930--NF392_RS04955NF392_RS04935NF392_RS04940NF392_RS04945NF392_RS04950
Location: 1022941..1025880 (2940 bp)
Type: Others
Protein ID: WP_049326519.1
Location: 1025877..1026818 (942 bp)
Type: Others
Protein ID: WP_002434737.1
Location: 1027009..1027113 (105 bp)
Type: Toxin
Protein ID: WP_030063529.1
Location: 1027141..1027171 (31 bp)
Type: Antitoxin
Protein ID: -
Location: 1030239..1030979 (741 bp)
Type: Others
Protein ID: WP_002453567.1
Location: 1027268..1028269 (1002 bp)
Type: Others
Protein ID: WP_023350053.1
Location: 1028471..1029040 (570 bp)
Type: Others
Protein ID: WP_002434864.1
Location: 1029232..1029603 (372 bp)
Type: Others
Protein ID: WP_002434824.1
Location: 1029681..1030106 (426 bp)
Type: Others
Protein ID: WP_002434751.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
NF392_RS049201022941..1025880+2940WP_049326519.1AAA family ATPase-
NF392_RS049251025877..1026818+942WP_002434737.13'-5' exoribonuclease YhaM-
NF392_RS049301027009..1027113+105WP_030063529.1type I toxin-antitoxin system Fst family toxinToxin
-1027141..1027171+31--Antitoxin
NF392_RS049351027268..1028269-1002WP_023350053.1peptidylprolyl isomerase-
NF392_RS049401028471..1029040-570WP_002434864.1DUF3267 domain-containing protein-
NF392_RS049451029232..1029603-372WP_002434824.1YtxH domain-containing protein-
NF392_RS049501029681..1030106-426WP_002434751.1HIT family protein-
NF392_RS049551030239..1030979+741WP_002453567.1ABC transporter ATP-binding protein-

Associated MGEs


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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 35 a.a.        Molecular weight: 3963.74 Da        Isoelectric Point: 10.7588

>T253178 WP_030063529.1 NZ_CP102089:1027009-1027113 [Staphylococcus capitis subsp. capitis]
MLFDIFVHIMATATSGCIVALFAHWLRTRNDKRK

Download         Length: 105 bp


Antitoxin


Download         Length: 31 bp

>AT253178 NZ_CP102089:1027141-1027171 [Staphylococcus capitis subsp. capitis]
AAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins


Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures


Toxin

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Source
ID
Structure
AlphaFold DBA0A507SQ11


Antitoxin

Download structure file

References