Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-YefM |
Location | 1771217..1771719 | Replicon | chromosome |
Accession | NZ_CP101915 | ||
Organism | Escherichia coli strain Evo1 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | U9YDH0 |
Locus tag | NP443_RS08420 | Protein ID | WP_000767829.1 |
Coordinates | 1771465..1771719 (+) | Length | 85 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | S1Q063 |
Locus tag | NP443_RS08415 | Protein ID | WP_001259255.1 |
Coordinates | 1771217..1771468 (+) | Length | 84 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NP443_RS08390 (1766394) | 1766394..1767461 | - | 1068 | WP_000080090.1 | bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB | - |
NP443_RS08395 (1767461) | 1767461..1768531 | - | 1071 | WP_000108933.1 | histidinol-phosphate transaminase | - |
NP443_RS08400 (1768528) | 1768528..1769832 | - | 1305 | WP_074514295.1 | histidinol dehydrogenase | - |
NP443_RS08405 (1769838) | 1769838..1770737 | - | 900 | WP_000131782.1 | ATP phosphoribosyltransferase | - |
NP443_RS08410 (1770883) | 1770883..1770933 | - | 51 | WP_001364200.1 | his operon leader peptide | - |
NP443_RS08415 (1771217) | 1771217..1771468 | + | 252 | WP_001259255.1 | YoeB-YefM toxin-antitoxin system antitoxin YefM | Antitoxin |
NP443_RS08420 (1771465) | 1771465..1771719 | + | 255 | WP_000767829.1 | type II toxin-antitoxin system mRNA interferase toxin YoeB | Toxin |
NP443_RS08425 (1771802) | 1771802..1772626 | + | 825 | WP_000754737.1 | SDR family oxidoreductase | - |
NP443_RS08430 (1772672) | 1772672..1773601 | + | 930 | WP_000803366.1 | LysR substrate-binding domain-containing protein | - |
NP443_RS08435 (1773816) | 1773816..1773878 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
NP443_RS08440 (1773868) | 1773868..1775226 | + | 1359 | WP_000019197.1 | putrescine/proton symporter PlaP | - |
NP443_RS08445 (1775405) | 1775405..1776463 | + | 1059 | WP_000492331.1 | thiosulfate utilization transporter TsuA/YeeE | - |
NP443_RS08450 (1776477) | 1776477..1776704 | + | 228 | WP_000985273.1 | thiosulfate utilization sulfurtransferase TsuB/YeeD | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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