Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/HigB-HigA
Location 163156..163750 Replicon chromosome
Accession NC_015458
Organism Pusillimonas sp. T7-7

Toxin (Protein)


Gene name graT Uniprot ID -
Locus tag PT7_RS00710 Protein ID WP_041682481.1
Coordinates 163472..163750 (-) Length 93 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag PT7_RS00705 Protein ID WP_013741232.1
Coordinates 163156..163458 (-) Length 101 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-1

(10-92)

Antitoxin

Toxin-antitoxin system, antidote protein, HigA

(1-97)


Sequences

Toxin        


Download         Length: 93 a.a.        Molecular weight: 10782.26 Da        Isoelectric Point: 9.2214

>T25206 WP_041682481.1 NC_015458:c163750-163472 [Pusillimonas sp. T7-7]
MIKSFRCVETQALYEGRRAARFANFKAVAERKLQMLDSANTLDFLRSPPGNRLEALKGNRTGQHSIRINNQWRICFIWDE
DGPWNVEIVDYH

Download         Length: 279 bp

>T25206 NC_015458:c163750-163472 [Pusillimonas sp. T7-7]
ATGATCAAGAGCTTCCGATGCGTTGAGACGCAGGCCCTTTACGAAGGACGTCGCGCCGCTCGGTTTGCGAACTTCAAAGC
CGTGGCCGAACGTAAACTACAAATGCTCGACAGCGCTAACACGCTGGATTTTCTACGGTCTCCGCCAGGCAACCGACTGG
AAGCACTCAAGGGAAATAGAACCGGGCAACACAGCATCCGCATTAATAATCAATGGCGCATCTGCTTTATCTGGGATGAA
GATGGGCCGTGGAACGTCGAGATCGTCGATTACCACTGA

Antitoxin


Download         Length: 101 a.a.        Molecular weight: 11139.93 Da        Isoelectric Point: 7.3177

>AT25206 WP_013741232.1 NC_015458:c163458-163156 [Pusillimonas sp. T7-7]
MSKNGMRPIHPGEILREEYLAPLGMSVNALSTMLHVPATRMNEIVRERRGITPDTALRLAAYFGGDAASWLNLQQAYDLK
ITEAKVAKLIAEEIRPLEHA

Download         Length: 303 bp

>AT25206 NC_015458:c163458-163156 [Pusillimonas sp. T7-7]
ATGTCCAAGAATGGCATGCGCCCGATCCACCCGGGCGAAATTCTGCGAGAAGAATACCTTGCGCCCCTGGGGATGAGCGT
CAACGCGCTATCCACCATGCTGCACGTTCCCGCCACTCGCATGAATGAAATAGTTCGCGAGCGCCGCGGCATCACCCCTG
ATACCGCATTACGGCTGGCGGCTTACTTCGGCGGCGACGCAGCATCTTGGTTAAATCTACAGCAAGCCTATGATCTAAAG
ATAACGGAGGCCAAAGTAGCCAAGCTTATCGCCGAAGAGATTCGGCCGCTAGAGCACGCTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References