Detailed information of TA system TA250896

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): yonT-SR6/-
• Location: 2270039..2270256
• Replicon: chromosome
• Accession: NZ_CP100651
• Organism: Bacillus halotolerans strain MEC_B334

Toxin (Protein)

• Gene name: yonT
• Uniprot ID: -
• Locus tag: NLW79_RS11560
• Protein ID: WP_254517601.1
• Coordinates: 2270080..2270256 (-)
• Length: 59 a.a.

Antitoxin (RNA)

Gene name	SR6
Locus tag	-
Coordinates	2270039..2270139 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
NLW79_RS11540	2266053..2267924	-	1872	WP_254517597.1	hypothetical protein	-
NLW79_RS11545	2268263..2269495	-	1233	WP_254517598.1	hypothetical protein	-
NLW79_RS11550	2269577..2269765	-	189	WP_254517599.1	hypothetical protein	-
NLW79_RS11555	2269810..2270061	-	252	WP_213417645.1	hypothetical protein	-
-	2270039..2270139	+	101	-	-	Antitoxin
NLW79_RS11560	2270080..2270256	-	177	WP_254517601.1	hypothetical protein	Toxin
-	2270197..2270296	+	100	NuclAT_0	-	-
-	2270197..2270296	+	100	NuclAT_0	-	-
-	2270197..2270296	+	100	NuclAT_0	-	-
-	2270197..2270296	+	100	NuclAT_0	-	-
NLW79_RS11565	2270490..2270711	-	222	WP_106019959.1	hypothetical protein	-
NLW79_RS11570	2270792..2271397	-	606	WP_106019960.1	hypothetical protein	-
NLW79_RS11575	2271617..2271943	-	327	WP_106019961.1	helix-turn-helix transcriptional regulator	-
NLW79_RS11580	2272895..2273089	+	195	WP_072692657.1	hypothetical protein	-
NLW79_RS11585	2273129..2275003	+	1875	Protein_2230	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	2198086..2368636	170550

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 59 a.a.
• Molecular weight: 6806.38 Da
• Isoelectric Point: 13.1139

>T250896 WP_254517601.1 NZ_CP100651:c2270256-2270080 [Bacillus halotolerans]
VLGKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Nucleotide

• Length: 177 bp

Antitoxin

Nucleotide

• Length: 101 bp

>AT250896 NZ_CP100651:2270039-2270139 [Bacillus halotolerans]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Structures

Antitoxin