Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-RelB |
Location | 2077797..2078316 | Replicon | chromosome |
Accession | NZ_CP100336 | ||
Organism | Streptococcus suis strain STC81 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | A0A0K2E7Z7 |
Locus tag | NKZ66_RS10365 | Protein ID | WP_013730620.1 |
Coordinates | 2077797..2078054 (-) | Length | 86 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | A0A0K2E7Z9 |
Locus tag | NKZ66_RS10370 | Protein ID | WP_002939010.1 |
Coordinates | 2078056..2078316 (-) | Length | 87 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
NKZ66_RS10350 (NKZ66_10350) | 2074267..2075997 | - | 1731 | WP_024417308.1 | membrane protein | - |
NKZ66_RS10355 (NKZ66_10355) | 2076361..2077233 | - | 873 | WP_024393352.1 | 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA | - |
NKZ66_RS10360 (NKZ66_10360) | 2077253..2077783 | - | 531 | WP_009910909.1 | DUF1697 domain-containing protein | - |
NKZ66_RS10365 (NKZ66_10365) | 2077797..2078054 | - | 258 | WP_013730620.1 | Txe/YoeB family addiction module toxin | Toxin |
NKZ66_RS10370 (NKZ66_10370) | 2078056..2078316 | - | 261 | WP_002939010.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
NKZ66_RS10375 (NKZ66_10375) | 2078392..2078847 | - | 456 | WP_024417307.1 | 8-oxo-dGTP diphosphatase | - |
NKZ66_RS10380 (NKZ66_10380) | 2078852..2079220 | - | 369 | WP_024417306.1 | hypothetical protein | - |
NKZ66_RS10385 (NKZ66_10385) | 2079213..2079782 | - | 570 | WP_024417305.1 | ribonuclease M5 | - |
NKZ66_RS10390 (NKZ66_10390) | 2079766..2080548 | - | 783 | WP_024417304.1 | TatD family hydrolase | - |
NKZ66_RS10395 (NKZ66_10395) | 2080655..2080792 | - | 138 | WP_002939016.1 | 50S ribosomal protein L34 | - |
NKZ66_RS10400 (NKZ66_10400) | 2080960..2081955 | - | 996 | WP_013730624.1 | RNA-binding cell elongation regulator Jag/EloR | - |
NKZ66_RS10405 (NKZ66_10405) | 2081975..2082787 | - | 813 | WP_012027897.1 | YidC/Oxa1 family membrane protein insertase | - |
NKZ66_RS10410 (NKZ66_10410) | 2082771..2083130 | - | 360 | WP_004194560.1 | ribonuclease P protein component | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0K2E7Z7 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0K2E7Z9 |