Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 4961851..4962550 Replicon chromosome
Accession NZ_CP099575
Organism Pseudomonas kermanshahensis strain F8

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag NG836_RS22265 Protein ID WP_252825197.1
Coordinates 4962254..4962550 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag NG836_RS22260 Protein ID WP_252825196.1
Coordinates 4961851..4962252 (-) Length 134 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NG836_RS22245 (NG836_22245) 4957879..4958808 - 930 WP_252825194.1 FAD-binding protein -
NG836_RS22250 (NG836_22250) 4958809..4959558 - 750 WP_027592887.1 electron transfer flavoprotein subunit beta/FixA family protein -
NG836_RS22255 (NG836_22255) 4960097..4961779 + 1683 WP_258703105.1 electron transfer flavoprotein-ubiquinone oxidoreductase -
NG836_RS22260 (NG836_22260) 4961851..4962252 - 402 WP_252825196.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
NG836_RS22265 (NG836_22265) 4962254..4962550 - 297 WP_252825197.1 type II toxin-antitoxin system MqsR family toxin Toxin
NG836_RS22270 (NG836_22270) 4962645..4963970 - 1326 WP_099454840.1 MFS transporter -
NG836_RS22275 (NG836_22275) 4964043..4964523 - 481 Protein_4369 histidine kinase -
NG836_RS22280 (NG836_22280) 4964693..4965169 - 477 WP_099454842.1 sigma-70 family RNA polymerase sigma factor -
NG836_RS22285 (NG836_22285) 4965398..4966570 + 1173 WP_252825198.1 efflux RND transporter periplasmic adaptor subunit -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Antitoxin MqsA/HigA-2

(1-131)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11205.07 Da        Isoelectric Point: 9.5031

>T249112 WP_252825197.1 NZ_CP099575:c4962550-4962254 [Pseudomonas kermanshahensis]
MEKRTPHCPLDRVRVLLSQGKVNTTQSATQGALALGLGPFDIVDIVRGLSVKDFYKSMTTYHDHRLWQDVYRPQTTVGRV
YLKLMVIDDLLIVSFKEL

Download         Length: 297 bp

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14621.69 Da        Isoelectric Point: 4.9402

>AT249112 WP_252825196.1 NZ_CP099575:c4962252-4961851 [Pseudomonas kermanshahensis]
MKCPMCGGAELVAQAHDMPYQYKGEATVIPDVFGDYCAACGESVLSMDEAQRISDLMSAFNRQVNAAAVDPGFIVSVRKK
FDLDQREAGEIFGGGVNAFSRYENGKTRPPVALVKLFKLLDRHPELFEEVRTA

Download         Length: 402 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References