Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/COG4683-HTH_37
Location 2839461..2840121 Replicon chromosome
Accession NZ_CP098778
Organism Enterobacter hormaechei strain YQ13422hy

Toxin (Protein)


Gene name higB Uniprot ID A0A2J0Q4X0
Locus tag ND013_RS13705 Protein ID WP_017383312.1
Coordinates 2839768..2840121 (-) Length 118 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID A0A2J0Q4Z7
Locus tag ND013_RS13700 Protein ID WP_017383313.1
Coordinates 2839461..2839763 (-) Length 101 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ND013_RS13685 2835631..2836956 + 1326 WP_126499110.1 SidA/IucD/PvdA family monooxygenase -
ND013_RS13690 2836983..2839172 + 2190 WP_126499109.1 TonB-dependent siderophore receptor -
ND013_RS13700 2839461..2839763 - 303 WP_017383313.1 XRE family transcriptional regulator Antitoxin
ND013_RS13705 2839768..2840121 - 354 WP_017383312.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
ND013_RS13710 2840312..2841262 - 951 WP_017383311.1 HTH-type transcriptional regulator Cbl -
ND013_RS13715 2841359..2842276 - 918 WP_003859531.1 nitrogen assimilation transcriptional regulator NAC -
ND013_RS13725 2842808..2843740 - 933 WP_126499108.1 L,D-transpeptidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(12-106)

Antitoxin

HigA2-like, helix-turn-helix domain

(18-89)


Sequences

Toxin        


Download         Length: 118 a.a.        Molecular weight: 13537.37 Da        Isoelectric Point: 9.9538

>T248084 WP_017383312.1 NZ_CP098778:c2840121-2839768 [Enterobacter hormaechei]
VWAIKTTDRFDDWFTSLNDSERASVLAALLVLRERGPGLSRPYADTLKGSRHSNMKELRIQSKGDPLRAFFAFDPNRTGI
VLCAGNKVGNERRFYDEMLLVADREYTRWLNTLKERN

Download         Length: 354 bp

Antitoxin


Download         Length: 101 a.a.        Molecular weight: 11028.85 Da        Isoelectric Point: 6.4727

>AT248084 WP_017383313.1 NZ_CP098778:c2839763-2839461 [Enterobacter hormaechei]
MGRTLEQLIADEKPEVVASAQAMATDILLNIHLAELREKVQKTQVDMARALGIKQPTVAVMEKAGRDIKLSSLKRYVEAA
GGKLRLDVELPDGSHYEFVL

Download         Length: 303 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A2J0Q4X0

Antitoxin

Source ID Structure
AlphaFold DB A0A2J0Q4Z7

References