Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 304008..304203 Replicon chromosome
Accession NZ_CP098743
Organism Enterococcus faecalis strain M9

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag NDO76_RS01525 Protein ID WP_122975133.1
Coordinates 304108..304203 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 304008..304073 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NDO76_RS01510 (299635) 299635..301383 + 1749 WP_016615923.1 PTS transporter subunit EIIC -
NDO76_RS01515 (301374) 301374..303407 + 2034 WP_002355275.1 BglG family transcription antiterminator -
NDO76_RS01520 (303418) 303418..303852 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- (304008) 304008..304073 + 66 NuclAT_15 - Antitoxin
NDO76_RS01525 (304108) 304108..304203 - 96 WP_122975133.1 type I toxin-antitoxin system Fst family toxin Toxin
NDO76_RS01530 (304449) 304449..306221 + 1773 WP_251846729.1 PTS mannitol-specific transporter subunit IIBC -
NDO76_RS01535 (306236) 306236..306673 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
NDO76_RS01540 (306688) 306688..307842 + 1155 WP_002386082.1 mannitol-1-phosphate 5-dehydrogenase -
NDO76_RS01545 (307910) 307910..309025 - 1116 WP_251846730.1 FAD-dependent oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3645.44 Da        Isoelectric Point: 4.5869

>T247969 WP_122975133.1 NZ_CP098743:c304203-304108 [Enterococcus faecalis]
MYDIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

Antitoxin


Download         Length: 66 bp

>AT247969 NZ_CP098743:304008-304073 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATCAGTAGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References