Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) higBA (relBE)/Tad-HTH_31
Location 83456..84060 Replicon chromosome
Accession NC_014125
Organism Legionella pneumophila 2300/99 Alcoy

Toxin (Protein)


Gene name higB Uniprot ID A0A128WF47
Locus tag LPA_RS00395 Protein ID WP_011212715.1
Coordinates 83456..83779 (+) Length 108 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag LPA_RS00400 Protein ID WP_011212716.1
Coordinates 83776..84060 (+) Length 95 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LPA_RS00370 78595..79899 + 1305 WP_011945267.1 ATP-grasp domain-containing protein -
LPA_RS00375 79920..80510 + 591 WP_011945268.1 alpha/beta hydrolase -
LPA_RS00380 80494..81441 + 948 WP_011945269.1 DMT family transporter -
LPA_RS00385 81541..81888 + 348 Protein_74 transposase family protein -
LPA_RS00390 82149..83372 + 1224 WP_011945271.1 site-specific integrase -
LPA_RS00395 83456..83779 + 324 WP_011212715.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
LPA_RS00400 83776..84060 + 285 WP_011212716.1 helix-turn-helix domain-containing protein Antitoxin
LPA_RS00405 84242..85057 + 816 WP_011945272.1 hypothetical protein -
LPA_RS00410 85832..87244 - 1413 WP_011945274.1 hypothetical protein -
LPA_RS00415 87275..87883 - 609 WP_011945275.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- flank IS/Tn - - 81541..81918 377


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(16-102)

Antitoxin

(32-86)


Sequences


Toxin        


Download         Length: 108 a.a.        Molecular weight: 12144.36 Da        Isoelectric Point: 9.7878

>T24755 WP_011212715.1 NC_014125:83456-83779 [Legionella pneumophila 2300/99 Alcoy]
MSWIVEFYNESVEEAILTMPPKIQARMIKLLELIETHGANLGPPHTEAMGDGLFEIRAKAQEGIGRSLYCYMKGKHIVVL
HAFVKKSAKTPKPDLQLALKRKREVEK

Download         Length: 324 bp

>T24755 NC_014125:83456-83779 [Legionella pneumophila 2300/99 Alcoy]
ATGTCTTGGATTGTTGAATTTTATAATGAGTCTGTTGAAGAGGCCATACTTACAATGCCGCCAAAAATTCAGGCTCGAAT
GATTAAACTTTTGGAATTGATTGAAACACATGGCGCTAATCTTGGGCCTCCTCATACAGAAGCGATGGGTGATGGGTTAT
TTGAGATTCGCGCAAAAGCTCAAGAAGGAATCGGGCGATCGCTTTATTGCTATATGAAGGGAAAGCATATTGTGGTTTTG
CATGCATTTGTAAAGAAAAGTGCAAAAACTCCAAAACCAGATTTGCAATTAGCTCTCAAAAGAAAGCGGGAGGTAGAAAA
ATGA

Antitoxin


Download         Length: 95 a.a.        Molecular weight: 10488.22 Da        Isoelectric Point: 9.8787

>AT24755 WP_011212716.1 NC_014125:83776-84060 [Legionella pneumophila 2300/99 Alcoy]
MMKLKTLKAKALKNPEVKEAYDALESEFALIDALLTMRQKAGLTQEELAERMGTKKGNISRLEKGNTNPSWNTLEKYAHA
CGFDISMAVKRIAS

Download         Length: 285 bp

>AT24755 NC_014125:83776-84060 [Legionella pneumophila 2300/99 Alcoy]
ATGATGAAACTTAAAACATTAAAGGCTAAAGCGTTAAAAAATCCTGAAGTAAAAGAAGCATACGATGCTTTGGAATCCGA
ATTTGCATTGATCGATGCGTTACTGACGATGCGTCAAAAAGCTGGATTAACTCAAGAAGAGTTAGCTGAGCGAATGGGGA
CAAAAAAAGGGAATATTTCTCGACTGGAAAAAGGAAATACTAATCCAAGCTGGAATACTTTAGAGAAATATGCACATGCG
TGTGGGTTTGATATTTCAATGGCAGTAAAGAGAATCGCTTCATAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A128WF47


Antitoxin

Source ID Structure

References