Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacAT/DUF1778(antitoxin)
Location 736486..737261 Replicon chromosome
Accession NZ_CP098350
Organism Klebsiella pneumoniae strain 52980_A4

Toxin (Protein)


Gene name TacT2 Uniprot ID A0A1Q4Q548
Locus tag NB670_RS03680 Protein ID WP_004150910.1
Coordinates 736776..737261 (+) Length 162 a.a.

Antitoxin (Protein)


Gene name TacA2 Uniprot ID W8UEW1
Locus tag NB670_RS03675 Protein ID WP_004150912.1
Coordinates 736486..736779 (+) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
NB670_RS03655 (NB670_03655) 731694..732296 - 603 WP_002916735.1 short chain dehydrogenase -
NB670_RS03660 (NB670_03660) 732394..733305 + 912 WP_004188550.1 LysR family transcriptional regulator -
NB670_RS03665 (NB670_03665) 733306..734454 - 1149 WP_004150915.1 PLP-dependent aspartate aminotransferase family protein -
NB670_RS03670 (NB670_03670) 734465..735841 - 1377 WP_004217775.1 cystathionine beta-synthase -
NB670_RS03675 (NB670_03675) 736486..736779 + 294 WP_004150912.1 DUF1778 domain-containing protein Antitoxin
NB670_RS03680 (NB670_03680) 736776..737261 + 486 WP_004150910.1 GNAT family N-acetyltransferase Toxin
NB670_RS03685 (NB670_03685) 737965..738558 + 594 WP_004188553.1 hypothetical protein -
NB670_RS03690 (NB670_03690) 738655..738871 + 217 Protein_725 transposase -
NB670_RS03700 (NB670_03700) 739548..740261 - 714 WP_002916694.1 DUF554 domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
flank IS/Tn - - 738655..738807 152


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(41-143)

Antitoxin

Vibrio phage ICP1, Orf50

(3-95)


Sequences

Toxin        


Download         Length: 162 a.a.        Molecular weight: 17551.59 Da        Isoelectric Point: 8.8818

>T247525 WP_004150910.1 NZ_CP098350:736776-737261 [Klebsiella pneumoniae]
MISAPEPLHAGHILTPFCCGIDSMDHWLKQRAMKNQVTGASRTFVCCDDAKVMAYYSLASSAVTTNTAPGRFRRNMPAPI
PVVVLGRLAVDKSLHGKGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEARDFYLRVGFEPSPMDPMMLMVTLRDLVN
A

Download         Length: 486 bp

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 10901.46 Da        Isoelectric Point: 6.3783

>AT247525 WP_004150912.1 NZ_CP098350:736486-736779 [Klebsiella pneumoniae]
MPAANSMSIKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYQEFLARLDQAPAPN
AALRKTMQTPAPWEQEE

Download         Length: 294 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A1Q4Q548

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GVL4

References