Detailed information of TA system
Overview
TA module
Type | II | Classification (family/domain) | higBA (relBE)/HigB-HigA |
Location | 1687299..1687835 | Replicon | chromosome |
Accession | NZ_CP097160 | ||
Organism | Gulosibacter sediminis strain ACHW.36C |
Toxin (Protein)
Gene name | higB | Uniprot ID | - |
Locus tag | M3M28_RS07775 | Protein ID | WP_249385932.1 |
Coordinates | 1687608..1687835 (-) | Length | 76 a.a. |
Antitoxin (Protein)
Gene name | graA | Uniprot ID | - |
Locus tag | M3M28_RS07770 | Protein ID | WP_249385931.1 |
Coordinates | 1687299..1687595 (-) | Length | 99 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
M3M28_RS07755 (M3M28_07755) | 1682409..1685339 | - | 2931 | WP_249385928.1 | helicase-related protein | - |
M3M28_RS07760 (M3M28_07760) | 1685478..1686335 | + | 858 | WP_249385929.1 | hypothetical protein | - |
M3M28_RS07765 (M3M28_07765) | 1686385..1687281 | - | 897 | WP_249385930.1 | hypothetical protein | - |
M3M28_RS07770 (M3M28_07770) | 1687299..1687595 | - | 297 | WP_249385931.1 | HigA family addiction module antitoxin | Antitoxin |
M3M28_RS07775 (M3M28_07775) | 1687608..1687835 | - | 228 | WP_249385932.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
M3M28_RS07780 (M3M28_07780) | 1688598..1689413 | + | 816 | WP_249385933.1 | hypothetical protein | - |
M3M28_RS07785 (M3M28_07785) | 1689394..1690686 | - | 1293 | WP_249385934.1 | amidase | - |
M3M28_RS07790 (M3M28_07790) | 1690782..1692167 | - | 1386 | WP_249385935.1 | lipase maturation factor family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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