Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) DinJ-YafQ (relBE)/YafQ-DinJ
Location 1173733..1174255 Replicon chromosome
Accession NZ_CP097121
Organism Fructilactobacillus carniphilus strain KI4_A6

Toxin (Protein)


Gene name yafQ Uniprot ID -
Locus tag M3M37_RS05915 Protein ID WP_252766489.1
Coordinates 1173733..1174011 (-) Length 93 a.a.

Antitoxin (Protein)


Gene name dinJ Uniprot ID -
Locus tag M3M37_RS05920 Protein ID WP_252766490.1
Coordinates 1174004..1174255 (-) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M3M37_RS05890 (M3M37_05890) 1169846..1170346 + 501 WP_252794894.1 hypothetical protein -
M3M37_RS05895 (M3M37_05895) 1170395..1171087 - 693 WP_252794895.1 hypothetical protein -
M3M37_RS05900 (M3M37_05900) 1171047..1172516 - 1470 WP_252794896.1 DUF1906 domain-containing protein -
M3M37_RS05905 (M3M37_05905) 1172767..1173084 + 318 WP_252794897.1 helix-turn-helix transcriptional regulator -
M3M37_RS05910 (M3M37_05910) 1173065..1173475 + 411 WP_252794898.1 ImmA/IrrE family metallo-endopeptidase -
M3M37_RS05915 (M3M37_05915) 1173733..1174011 - 279 WP_252766489.1 type II toxin-antitoxin system YafQ family toxin Toxin
M3M37_RS05920 (M3M37_05920) 1174004..1174255 - 252 WP_252766490.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
M3M37_RS05925 (M3M37_05925) 1175083..1175814 - 732 WP_252794899.1 LysM peptidoglycan-binding domain-containing protein -
M3M37_RS05930 (M3M37_05930) 1176085..1177776 - 1692 WP_252794900.1 alpha-glucosidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(9-91)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(4-67)


Sequences

Toxin        


Download         Length: 93 a.a.        Molecular weight: 11401.97 Da        Isoelectric Point: 8.3471

>T244802 WP_252766489.1 NZ_CP097121:c1174011-1173733 [Fructilactobacillus carniphilus]
MTKQYKPAFENQFKKHYKQMLKQPKYNKNQFNEIYYLLINDEEIPAKFNDHNLINRKPERELHIKPDWLLIYRYDGDYIK
FIDTGSHSDLFE

Download         Length: 279 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9591.75 Da        Isoelectric Point: 5.8150

>AT244802 WP_252766490.1 NZ_CP097121:c1174255-1174004 [Fructilactobacillus carniphilus]
MKTNTAQIHFRTSTLNKDEFEKVLKENGLTAPEAFRIFMKQTINNNGLPFEVNQPNKRLKTAISSDDYVKFDNAQEGLDW
LND

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References