244800

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) DinJ-YafQ (relBE)/YafQ-DinJ
Location 807804..808326 Replicon chromosome
Accession NZ_CP097117
Organism Fructilactobacillus cliffordii strain KI11_D11

Toxin (Protein)


Gene name yafQ Uniprot ID -
Locus tag M3M38_RS04060 Protein ID WP_252766489.1
Coordinates 807804..808082 (-) Length 93 a.a.

Antitoxin (Protein)


Gene name dinJ Uniprot ID -
Locus tag M3M38_RS04065 Protein ID WP_252766490.1
Coordinates 808075..808326 (-) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M3M38_RS04040 (M3M38_04040) 803903..804436 + 534 WP_252813633.1 hypothetical protein -
M3M38_RS04045 (M3M38_04045) 804437..806587 - 2151 WP_252813634.1 DUF1906 domain-containing protein -
M3M38_RS04050 (M3M38_04050) 806838..807155 + 318 WP_252797366.1 helix-turn-helix transcriptional regulator -
M3M38_RS04055 (M3M38_04055) 807136..807546 + 411 WP_252766488.1 ImmA/IrrE family metallo-endopeptidase -
M3M38_RS04060 (M3M38_04060) 807804..808082 - 279 WP_252766489.1 type II toxin-antitoxin system YafQ family toxin Toxin
M3M38_RS04065 (M3M38_04065) 808075..808326 - 252 WP_252766490.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin
M3M38_RS04070 (M3M38_04070) 809148..809879 - 732 WP_252813635.1 LysM domain-containing protein -
M3M38_RS04075 (M3M38_04075) 810151..811842 - 1692 WP_252813636.1 alpha-glucosidase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(9-91)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(4-67)


Sequences

Toxin        


Download         Length: 93 a.a.        Molecular weight: 11401.97 Da        Isoelectric Point: 8.3471

>T244800 WP_252766489.1 NZ_CP097117:c808082-807804 [Fructilactobacillus cliffordii]
MTKQYKPAFENQFKKHYKQMLKQPKYNKNQFNEIYYLLINDEEIPAKFNDHNLINRKPERELHIKPDWLLIYRYDGDYIK
FIDTGSHSDLFE

Download         Length: 279 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9591.75 Da        Isoelectric Point: 5.8150

>AT244800 WP_252766490.1 NZ_CP097117:c808326-808075 [Fructilactobacillus cliffordii]
MKTNTAQIHFRTSTLNKDEFEKVLKENGLTAPEAFRIFMKQTINNNGLPFEVNQPNKRLKTAISSDDYVKFDNAQEGLDW
LND

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References