Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-RelB |
Location | 1272695..1273200 | Replicon | chromosome |
Accession | NZ_CP097107 | ||
Organism | Citrobacter freundii strain GMU8049 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | A0A5H6P158 |
Locus tag | M3L74_RS06580 | Protein ID | WP_023218457.1 |
Coordinates | 1272695..1272955 (-) | Length | 87 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | A0A5H6P2W8 |
Locus tag | M3L74_RS06585 | Protein ID | WP_052932205.1 |
Coordinates | 1272955..1273200 (-) | Length | 82 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
M3L74_RS06560 (1268237) | 1268237..1268830 | - | 594 | WP_003845054.1 | Slp family lipoprotein | - |
M3L74_RS06565 (1268954) | 1268954..1269208 | - | 255 | WP_003845055.1 | DUF1471 domain-containing protein | - |
M3L74_RS06570 (1269728) | 1269728..1271626 | + | 1899 | WP_088903227.1 | methyl-accepting chemotaxis protein | - |
M3L74_RS06575 (1271801) | 1271801..1272430 | + | 630 | WP_003028217.1 | DNA-binding protein | - |
M3L74_RS06580 (1272695) | 1272695..1272955 | - | 261 | WP_023218457.1 | Txe/YoeB family addiction module toxin | Toxin |
M3L74_RS06585 (1272955) | 1272955..1273200 | - | 246 | WP_052932205.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
M3L74_RS06590 (1273683) | 1273683..1273945 | + | 263 | Protein_1219 | ogr/Delta-like zinc finger family protein | - |
M3L74_RS06595 (1274138) | 1274138..1274443 | - | 306 | WP_087878867.1 | hypothetical protein | - |
M3L74_RS06600 (1274966) | 1274966..1276612 | + | 1647 | WP_232481245.1 | phage tailspike protein | - |
M3L74_RS06605 (1276710) | 1276710..1277912 | + | 1203 | WP_160179992.1 | acyltransferase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Genomic island | - | acrB | 1251493..1278943 | 27450 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A5H6P158 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A5H6P2W8 |