Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2543644..2543915 Replicon chromosome
Accession NZ_CP097006
Organism Enterococcus faecalis strain LS05-1

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag M2924_RS11925 Protein ID WP_002375510.1
Coordinates 2543763..2543915 (-) Length 51 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2543644..2543830 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
M2924_RS11910 (2539611) 2539611..2542355 + 2745 WP_104807179.1 glycosyl hydrolase family 65 protein -
M2924_RS11915 (2542370) 2542370..2543020 + 651 WP_002375514.1 beta-phosphoglucomutase -
- (2543089) 2543089..2543221 + 133 NuclAT_12 - -
- (2543268) 2543268..2543455 + 188 NuclAT_4 - -
M2924_RS11920 (2543388) 2543388..2543492 - 105 WP_023894767.1 putative holin-like toxin -
- (2543644) 2543644..2543789 + 146 NuclAT_11 - -
- (2543644) 2543644..2543830 + 187 NuclAT_5 - Antitoxin
M2924_RS11925 (2543763) 2543763..2543915 - 153 WP_002375510.1 type I toxin-antitoxin system toxin PepG1 Toxin
M2924_RS11930 (2544140) 2544140..2545111 - 972 WP_002381060.1 ribose-phosphate diphosphokinase -
M2924_RS11935 (2545286) 2545286..2545723 - 438 WP_002354871.1 peptide-methionine (R)-S-oxide reductase MsrB -
M2924_RS11940 (2545856) 2545856..2546410 - 555 WP_002354869.1 Maf family protein -
M2924_RS11945 (2546435) 2546435..2548567 - 2133 WP_002375508.1 DNA mismatch repair endonuclease MutL -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(17-50)


Sequences


Toxin        


Download         Length: 51 a.a.        Molecular weight: 5637.90 Da        Isoelectric Point: 11.0942

>T244371 WP_002375510.1 NZ_CP097006:c2543915-2543763 [Enterococcus faecalis]
VVRMSALPKFTERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 153 bp


Antitoxin


Download         Length: 187 bp

>AT244371 NZ_CP097006:2543644-2543830 [Enterococcus faecalis]
TGTGCTATAATGAAAATGAAAAGAGAGATATGAGTCAACATACCTCTCTAGTGTAGAGCCGTTTGAGACGGTGACCGATT
GTATTATTTAAAAATAACCGTACTGGTCAAAGTAGACGGTTATTTTTTTTTGTCATTTTTAAGCAATTTCACAATCAGTG
CAATCAAAGCAATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References