Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-YefM
Location 1276815..1277335 Replicon chromosome
Accession NZ_CP096882
Organism Pseudarthrobacter sp. SSS035

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag MUN23_RS05765 Protein ID WP_248762949.1
Coordinates 1277063..1277335 (+) Length 91 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag MUN23_RS05760 Protein ID WP_248762947.1
Coordinates 1276815..1277066 (+) Length 84 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MUN23_RS05735 1273175..1274092 + 918 WP_248762939.1 oxygenase MpaB family protein -
MUN23_RS05745 1274582..1274908 + 327 WP_248762941.1 hypothetical protein -
MUN23_RS05750 1275309..1276202 - 894 WP_248762943.1 GIY-YIG nuclease family protein -
MUN23_RS05755 1276436..1276690 - 255 WP_248762945.1 hypothetical protein -
MUN23_RS05760 1276815..1277066 + 252 WP_248762947.1 type II toxin-antitoxin system prevent-host-death family antitoxin Antitoxin
MUN23_RS05765 1277063..1277335 + 273 WP_248762949.1 Txe/YoeB family addiction module toxin Toxin
MUN23_RS05775 1277562..1280981 + 3420 WP_248762955.1 DNA polymerase III subunit gamma and tau -
MUN23_RS05780 1281045..1281644 + 600 WP_056348564.1 recombination mediator RecR -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-88)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(2-73)


Sequences

Toxin        


Download         Length: 91 a.a.        Molecular weight: 10779.12 Da        Isoelectric Point: 8.8479

>T244081 WP_248762949.1 NZ_CP096882:1277063-1277335 [Pseudarthrobacter sp. SSS035]
MKHSWDESAWEDYLWWQAQDRRTMKRIKTLIQDIARNGNEGIGKPEPLKHGFHGYWSRRITDEHRLVYRYVESGSGVEIL
IAACRYHYGN

Download         Length: 273 bp

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9532.61 Da        Isoelectric Point: 4.9108

>AT244081 WP_248762947.1 NZ_CP096882:1276815-1277066 [Pseudarthrobacter sp. SSS035]
VKTLTYSQSRAHYKETLDAVTDDREEVIITRPGKEDVVIVSRADYESLRETAYLLRSPANARRILESIERLESGHGTERD
LLE

Download         Length: 252 bp


Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References