Detailed information of TA system
Overview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
Location | 2426615..2427132 | Replicon | chromosome |
Accession | NZ_CP094783 | ||
Organism | Staphylococcus aureus strain IVB6170 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | - |
Locus tag | MUA30_RS12225 | Protein ID | WP_262610396.1 |
Coordinates | 2426615..2426881 (-) | Length | 89 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | - |
Locus tag | MUA30_RS12230 | Protein ID | WP_262610397.1 |
Coordinates | 2426881..2427132 (-) | Length | 84 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MUA30_RS12195 (2422038) | 2422038..2422574 | - | 537 | WP_262610393.1 | GNAT family N-acetyltransferase | - |
MUA30_RS12200 (2422807) | 2422807..2423631 | - | 825 | WP_262610394.1 | formate/nitrite transporter family protein | - |
MUA30_RS12205 (2423848) | 2423848..2424030 | - | 183 | WP_000230294.1 | hypothetical protein | - |
MUA30_RS12210 (2424114) | 2424114..2424581 | - | 468 | WP_262610395.1 | SRPBCC domain-containing protein | - |
MUA30_RS12215 (2424767) | 2424767..2426320 | - | 1554 | WP_000727769.1 | zinc ABC transporter substrate-binding lipoprotein AdcA | - |
MUA30_RS12220 (2426509) | 2426509..2426580 | - | 72 | Protein_2361 | hypothetical protein | - |
MUA30_RS12225 (2426615) | 2426615..2426881 | - | 267 | WP_262610396.1 | Txe/YoeB family addiction module toxin | Toxin |
MUA30_RS12230 (2426881) | 2426881..2427132 | - | 252 | WP_262610397.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
MUA30_RS12235 (2427296) | 2427296..2427376 | - | 81 | WP_223197974.1 | hypothetical protein | - |
MUA30_RS12240 (2427404) | 2427404..2428003 | - | 600 | WP_000162810.1 | DsbA family protein | - |
MUA30_RS12245 (2428022) | 2428022..2428390 | - | 369 | WP_160195056.1 | DUF4467 domain-containing protein | - |
MUA30_RS12250 (2428645) | 2428645..2429895 | + | 1251 | Protein_2367 | FemA/FemB family glycyltransferase FmhA | - |
MUA30_RS12255 (2429992) | 2429992..2430723 | - | 732 | WP_000615461.1 | amino acid ABC transporter ATP-binding protein | - |
MUA30_RS12260 (2430720) | 2430720..2431439 | - | 720 | WP_000479576.1 | amino acid ABC transporter permease | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 89 a.a. Molecular weight: 10419.92 Da Isoelectric Point: 9.9143
>T240395 WP_262610396.1 NZ_CP094783:c2426881-2426615 [Staphylococcus aureus]
MARLNITFSPQAFEDYKYFQQNDKKIVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
MARLNITFSPQAFEDYKYFQQNDKKIVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
Download Length: 267 bp
>T240395 NZ_LS998785:c4351700-4351152 [Escherichia coli]
ATGTCTCATAATTCAGATATCTATAAACTGATCGGAGCGGCCGCAGGTGTTGAAAATGGTCGCTCTGAAGCATCCTTAAA
CTCTACTGACAGTCAAGAGCAGGCTTTTGAATCCGCATTTGAGCCGTCTAATCATGAACGCGATGATGATTCTTCTTCAG
AAAATAAGGCTATTCTGGAGGAAGAAGAGTTTGGTTCTAATACTGGTGCATTGCATGAGTTTATGCAGCAGAACAGAATG
GACAGTCTTCAAGCTCAGCTTGATATGCTCAAATCACAAGTACGGGATAAGATAGCTGACGCAACTGGTAAAGAAATAGA
CAATGAGCTCCGGACAAAAATGGCATCATTCACGGTTTGGTTTATGTCGTGTTGGTGCTTATTCGTTGTCGCAATGTTTA
CATCGTTTCTTATTGCACATGAAGGAAAGGCTCCAGTTGAAGCGATCGTTGCATTACTAGGTACAAGTACAATTAGTATT
GTTGGTTTGGTTGGTTTCGTTGTTAGTGGATTGTTCAAATCAAGAAAAGATAGTGATAAAGAAAAATAA
ATGTCTCATAATTCAGATATCTATAAACTGATCGGAGCGGCCGCAGGTGTTGAAAATGGTCGCTCTGAAGCATCCTTAAA
CTCTACTGACAGTCAAGAGCAGGCTTTTGAATCCGCATTTGAGCCGTCTAATCATGAACGCGATGATGATTCTTCTTCAG
AAAATAAGGCTATTCTGGAGGAAGAAGAGTTTGGTTCTAATACTGGTGCATTGCATGAGTTTATGCAGCAGAACAGAATG
GACAGTCTTCAAGCTCAGCTTGATATGCTCAAATCACAAGTACGGGATAAGATAGCTGACGCAACTGGTAAAGAAATAGA
CAATGAGCTCCGGACAAAAATGGCATCATTCACGGTTTGGTTTATGTCGTGTTGGTGCTTATTCGTTGTCGCAATGTTTA
CATCGTTTCTTATTGCACATGAAGGAAAGGCTCCAGTTGAAGCGATCGTTGCATTACTAGGTACAAGTACAATTAGTATT
GTTGGTTTGGTTGGTTTCGTTGTTAGTGGATTGTTCAAATCAAGAAAAGATAGTGATAAAGAAAAATAA
Antitoxin
Download Length: 84 a.a. Molecular weight: 9445.66 Da Isoelectric Point: 4.3407
>AT240395 WP_262610397.1 NZ_CP094783:c2427132-2426881 [Staphylococcus aureus]
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKIITKD
IDV
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKIITKD
IDV
Download Length: 252 bp
>AT240395 NZ_LS998785:c4352196-4351723 [Escherichia coli]
ATGTACAGTCCGGTACAAATAGCCAATAAATTCATAACGTTGGGAAACCAACATCATAATCCTCTGACCCACATGCAACT
GCAGAAGCTTACTTATATTGCCCATGGTTACTATTTAGCATTAACAGGTAAGCCTTTGCTCAATGAATGTGTCTCCGCGT
GGAAGTACGGTCCAGTTATTCCTGGAATGTACGATGCTTTCAAAGACTATGGGAATAAACCTGTTACGAATGTAGCAGTA
GCTCCTTTTGGTGGCATCGTTACTATGGATCCGCAAGCAGAGAGCATTATCGGGGCTGTTTATAAGTTTTACGGCTCGAA
AAATGGAATTGAGTTATCAACTCTAACTCATATGCCAGGTACGCCTTGGTCACAAGCTTATAATGGTATTGGCTCGTCGA
TCATCTCAAATGATGCGATCAAGGCTTATTATCATGATTTATTGAATAACCGACAGCAATGTCAGGGCCTCTGA
ATGTACAGTCCGGTACAAATAGCCAATAAATTCATAACGTTGGGAAACCAACATCATAATCCTCTGACCCACATGCAACT
GCAGAAGCTTACTTATATTGCCCATGGTTACTATTTAGCATTAACAGGTAAGCCTTTGCTCAATGAATGTGTCTCCGCGT
GGAAGTACGGTCCAGTTATTCCTGGAATGTACGATGCTTTCAAAGACTATGGGAATAAACCTGTTACGAATGTAGCAGTA
GCTCCTTTTGGTGGCATCGTTACTATGGATCCGCAAGCAGAGAGCATTATCGGGGCTGTTTATAAGTTTTACGGCTCGAA
AAATGGAATTGAGTTATCAACTCTAACTCATATGCCAGGTACGCCTTGGTCACAAGCTTATAATGGTATTGGCTCGTCGA
TCATCTCAAATGATGCGATCAAGGCTTATTATCATGATTTATTGAATAACCGACAGCAATGTCAGGGCCTCTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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