Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
| Location | 2443105..2443622 | Replicon | chromosome |
| Accession | NZ_CP094782 | ||
| Organism | Staphylococcus aureus strain IVB6172 | ||
Toxin (Protein)
| Gene name | yoeB | Uniprot ID | A0A2S6D1N9 |
| Locus tag | MUA59_RS12300 | Protein ID | WP_000113263.1 |
| Coordinates | 2443105..2443371 (-) | Length | 89 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | T1YB60 |
| Locus tag | MUA59_RS12305 | Protein ID | WP_000584499.1 |
| Coordinates | 2443371..2443622 (-) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MUA59_RS12275 (MUA59_12245) | 2438257..2438793 | - | 537 | WP_262607697.1 | GNAT family N-acetyltransferase | - |
| MUA59_RS12280 (MUA59_12250) | 2439316..2440140 | - | 825 | WP_000594640.1 | formate/nitrite transporter family protein | - |
| MUA59_RS12285 (MUA59_12255) | 2440343..2440525 | - | 183 | WP_000079140.1 | hypothetical protein | - |
| MUA59_RS12290 (MUA59_12260) | 2440612..2441079 | - | 468 | WP_000153340.1 | SRPBCC domain-containing protein | - |
| MUA59_RS12295 (MUA59_12265) | 2441265..2442812 | - | 1548 | WP_000727756.1 | zinc ABC transporter substrate-binding lipoprotein AdcA | - |
| MUA59_RS12300 (MUA59_12270) | 2443105..2443371 | - | 267 | WP_000113263.1 | Txe/YoeB family addiction module toxin | Toxin |
| MUA59_RS12305 (MUA59_12275) | 2443371..2443622 | - | 252 | WP_000584499.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| MUA59_RS12310 (MUA59_12280) | 2443786..2443887 | - | 102 | Protein_2382 | hypothetical protein | - |
| MUA59_RS12315 (MUA59_12285) | 2443894..2444493 | - | 600 | WP_262607698.1 | DsbA family protein | - |
| MUA59_RS12320 (MUA59_12290) | 2444512..2444874 | - | 363 | WP_000819843.1 | DUF4467 domain-containing protein | - |
| MUA59_RS12325 (MUA59_12295) | 2445129..2446379 | + | 1251 | Protein_2385 | FemA/FemB family glycyltransferase FmhA | - |
| MUA59_RS12330 (MUA59_12300) | 2446476..2447207 | - | 732 | WP_000615461.1 | amino acid ABC transporter ATP-binding protein | - |
| MUA59_RS12335 (MUA59_12305) | 2447204..2447923 | - | 720 | WP_000479576.1 | amino acid ABC transporter permease | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 89 a.a. Molecular weight: 10437.01 Da Isoelectric Point: 10.1628
>T240374 WP_000113263.1 NZ_CP094782:c2443371-2443105 [Staphylococcus aureus]
MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALKGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
MARLNITFSPQAFEDYKYFQQNDKKMVKKINELLKSIDRNGALKGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
Download Length: 267 bp
>T240374 NZ_LS998783:2719738-2720019 [Pseudomonas aeruginosa]
ATGACCTATGAGCTGGAGTTCCTGCCCTCAGCCCTGAAGGAGTGGCAGAAGCTCGGCCATACGGTGCGCGAGCAGATCAA
AAAGAAACTGCGCGAGCGCCTGGATAATCCCAAGGTTCAGGCCGACGCCCTCAGGGATATGCCGGGGCACTACAAAATCA
AGCTGCGTGCATCGGGCTATCGTCTGGTATACCGCGTCGAAGATGAGCGCGTGGTGGTCGTGGTGGTTGCCGTTGGCAAG
CGCGAGCGTGGGGCCGCTTACCAATCTGCCAAGGGCCGTTAG
ATGACCTATGAGCTGGAGTTCCTGCCCTCAGCCCTGAAGGAGTGGCAGAAGCTCGGCCATACGGTGCGCGAGCAGATCAA
AAAGAAACTGCGCGAGCGCCTGGATAATCCCAAGGTTCAGGCCGACGCCCTCAGGGATATGCCGGGGCACTACAAAATCA
AGCTGCGTGCATCGGGCTATCGTCTGGTATACCGCGTCGAAGATGAGCGCGTGGTGGTCGTGGTGGTTGCCGTTGGCAAG
CGCGAGCGTGGGGCCGCTTACCAATCTGCCAAGGGCCGTTAG
Antitoxin
Download Length: 84 a.a. Molecular weight: 9433.60 Da Isoelectric Point: 4.3407
>AT240374 WP_000584499.1 NZ_CP094782:c2443622-2443371 [Staphylococcus aureus]
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKD
IDV
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKD
IDV
Download Length: 252 bp
>AT240374 NZ_LS998783:2719503-2719748 [Pseudomonas aeruginosa]
ATGCAGAGTATCTTGGCTGACGTCGCTGTCAGCGTTTCTGAGTTGAAGAAAAATCCGTCGGGCATCCTGGCTGGTGCAGG
TGGTATGCCTGTCGCCGTGCTCAACCACAATCGCGTCATGGGATACATGGTGCCGGCAGAGCTCTATGAGCAGATGATGG
AGCGCCTAGATGATCTGGAGTTGGTCGAAATAGTGAAGGCTCGCTCGGGCGAGGAGTCTGTCCCGGTGCGTTTGGATGAC
CTATGA
ATGCAGAGTATCTTGGCTGACGTCGCTGTCAGCGTTTCTGAGTTGAAGAAAAATCCGTCGGGCATCCTGGCTGGTGCAGG
TGGTATGCCTGTCGCCGTGCTCAACCACAATCGCGTCATGGGATACATGGTGCCGGCAGAGCTCTATGAGCAGATGATGG
AGCGCCTAGATGATCTGGAGTTGGTCGAAATAGTGAAGGCTCGCTCGGGCGAGGAGTCTGTCCCGGTGCGTTTGGATGAC
CTATGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|