Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
| Location | 2501014..2501531 | Replicon | chromosome |
| Accession | NZ_CP093935 | ||
| Organism | Staphylococcus aureus strain WA121-2021_16354 | ||
Toxin (Protein)
| Gene name | yoeB | Uniprot ID | A0A3A3ATA4 |
| Locus tag | MQP46_RS12635 | Protein ID | WP_000113265.1 |
| Coordinates | 2501014..2501280 (-) | Length | 89 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | T1YB60 |
| Locus tag | MQP46_RS12640 | Protein ID | WP_000584499.1 |
| Coordinates | 2501280..2501531 (-) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MQP46_RS12605 (2496442) | 2496442..2496978 | - | 537 | WP_000169317.1 | GNAT family N-acetyltransferase | - |
| MQP46_RS12610 (2497212) | 2497212..2498036 | - | 825 | WP_000572038.1 | formate/nitrite transporter family protein | - |
| MQP46_RS12615 (2498253) | 2498253..2498435 | - | 183 | WP_000230292.1 | hypothetical protein | - |
| MQP46_RS12620 (2498519) | 2498519..2498986 | - | 468 | WP_000153347.1 | SRPBCC domain-containing protein | - |
| MQP46_RS12625 (2499172) | 2499172..2500719 | - | 1548 | WP_000727756.1 | zinc ABC transporter substrate-binding lipoprotein AdcA | - |
| MQP46_RS12630 (2500908) | 2500908..2500979 | - | 72 | Protein_2444 | hypothetical protein | - |
| MQP46_RS12635 (2501014) | 2501014..2501280 | - | 267 | WP_000113265.1 | Txe/YoeB family addiction module toxin | Toxin |
| MQP46_RS12640 (2501280) | 2501280..2501531 | - | 252 | WP_000584499.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| MQP46_RS12645 (2501696) | 2501696..2501776 | - | 81 | WP_223197974.1 | hypothetical protein | - |
| MQP46_RS12650 (2501804) | 2501804..2502403 | - | 600 | WP_000162810.1 | DsbA family protein | - |
| MQP46_RS12655 (2502422) | 2502422..2502784 | - | 363 | WP_000819843.1 | DUF4467 domain-containing protein | - |
| MQP46_RS12660 (2503039) | 2503039..2504289 | + | 1251 | WP_001012225.1 | FemA/FemB family glycyltransferase FmhA | - |
| MQP46_RS12665 (2504386) | 2504386..2505117 | - | 732 | WP_000615461.1 | amino acid ABC transporter ATP-binding protein | - |
| MQP46_RS12670 (2505114) | 2505114..2505833 | - | 720 | WP_000479576.1 | amino acid ABC transporter permease | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 89 a.a. Molecular weight: 10436.96 Da Isoelectric Point: 10.0573
>T239118 WP_000113265.1 NZ_CP093935:c2501280-2501014 [Staphylococcus aureus]
MARLNITFSPQAFEDYKYFQQNNKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
MARLNITFSPQAFEDYKYFQQNNKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
Download Length: 267 bp
>T239118 NZ_LR890606:1062841-1063176 [Escherichia coli]
ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCTGG
ACATCGTCCAGCTGTTGTCCTGAGTCCTTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGC
AATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGT
ATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACAGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAA
CGTACTGATTGGGTAG
ATGGTAAGCCGATACGTACCCGATATGGGCGATCTGATTTGGGTTGATTTTGACCCGACAAAAGGTAGCGAGCAAGCTGG
ACATCGTCCAGCTGTTGTCCTGAGTCCTTTCATGTACAACAACAAAACAGGTATGTGTCTGTGTGTTCCTTGTACAACGC
AATCAAAAGGATATCCGTTCGAAGTTGTTTTATCCGGTCAGGAACGTGATGGCGTAGCGTTAGCTGATCAGGTAAAAAGT
ATCGCCTGGCGGGCAAGAGGAGCAACGAAGAAAGGAACAGTTGCCCCAGAGGAATTACAACTCATTAAAGCCAAAATTAA
CGTACTGATTGGGTAG
Antitoxin
Download Length: 84 a.a. Molecular weight: 9433.60 Da Isoelectric Point: 4.3407
>AT239118 WP_000584499.1 NZ_CP093935:c2501531-2501280 [Staphylococcus aureus]
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKD
IDV
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKD
IDV
Download Length: 252 bp
>AT239118 NZ_LR890606:1062593-1062841 [Escherichia coli]
ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCT
GAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTA
CGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAA
GTCTGGTAA
ATGATCCACAGTAGCGTAAAGCGTTGGGGAAATTCACCGGCGGTGCGGATCCCGGCTACGTTAATGCAGGCGCTCAATCT
GAATATTGATGATGAAGTGAAGATTGACCTGGTGGATGGCAAATTAATTATTGAGCCAGTGCGTAAAGAGCCCGTATTTA
CGCTTGCTGAACTGGTCAACGACATCACGCCGGAAAACCTCCACGAGAATATCGACTGGGGAGAGCCGAAAGATAAGGAA
GTCTGGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|