Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) fst-RNAII/-
Location 287594..287788 Replicon chromosome
Accession NZ_CP092907
Organism Enterococcus faecalis strain LJX 0909

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag MK744_RS01465 Protein ID WP_015543884.1
Coordinates 287693..287788 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 287594..287658 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
MK744_RS01450 (283226) 283226..284968 + 1743 WP_185938086.1 PTS transporter subunit EIIC -
MK744_RS01455 (284959) 284959..286992 + 2034 WP_002355275.1 BglG family transcription antiterminator -
MK744_RS01460 (287003) 287003..287437 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- (287594) 287594..287658 + 65 NuclAT_16 - Antitoxin
MK744_RS01465 (287693) 287693..287788 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
MK744_RS01470 (288035) 288035..289807 + 1773 WP_002387897.1 PTS mannitol-specific transporter subunit IIBC -
MK744_RS01475 (289822) 289822..290259 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
MK744_RS01480 (290274) 290274..291428 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
MK744_RS01485 (291496) 291496..292611 - 1116 WP_113848677.1 FAD-dependent oxidoreductase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T237357 WP_015543884.1 NZ_CP092907:c287788-287693 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T237357 NZ_LR881940:657412-657726 [Escherichia coli]
ATGCACCTGATAACTCAAAAAGCATTGAAAGATGCTGCGGAAAAATACCCGCAACATAAAACGGAGTTGGTGGCTCTGGG
GAACACGATTGCTAAGGGATATTTCAAAAAACCTGAGTCATTAAAAGCAGTATTCCCATCTCTGGATAACTTCAAATATC
TGGATAAGCATTATGTTTTCAATGTTGGGGGCAATGAATTACGTGTTGTAGCAATGGTCTTTTTTGAATCGCAAAAGTGC
TACATACGTGAAGTTATGACGCATAAAGAATACGATTTCTTTACCGCTGTTCATCGTACTAAGGGGAAAAAATGA

Antitoxin


Download         Length: 65 bp

>AT237357 NZ_CP092907:287594-287658 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGCAGTAGGGTGTCTTTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References