Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | txpA-ratA/- |
Location | 676358..676590 | Replicon | chromosome |
Accession | NZ_CP092576 | ||
Organism | Enterococcus faecalis strain VRE-WC031 |
Toxin (Protein)
Gene name | txpA | Uniprot ID | C7CXQ5 |
Locus tag | MKI49_RS03515 | Protein ID | WP_002355568.1 |
Coordinates | 676358..676474 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | ratA | ||
Locus tag | - | ||
Coordinates | 676385..676590 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
MKI49_RS03505 (671796) | 671796..674054 | + | 2259 | WP_002363179.1 | DNA helicase PcrA | - |
MKI49_RS03510 (674180) | 674180..676210 | + | 2031 | WP_002368024.1 | NAD-dependent DNA ligase LigA | - |
MKI49_RS03515 (676358) | 676358..676474 | + | 117 | WP_002355568.1 | putative holin-like toxin | Toxin |
- (676385) | 676385..676590 | - | 206 | NuclAT_3 | - | Antitoxin |
- (676457) | 676457..676592 | - | 136 | NuclAT_5 | - | - |
- (676457) | 676457..676612 | - | 156 | NuclAT_12 | - | - |
MKI49_RS03520 (676792) | 676792..677097 | + | 306 | WP_002355569.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC | - |
MKI49_RS03525 (677097) | 677097..678566 | + | 1470 | WP_002368026.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA | - |
MKI49_RS03530 (678566) | 678566..679996 | + | 1431 | WP_002358703.1 | Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB | - |
MKI49_RS03535 (680015) | 680015..681103 | + | 1089 | WP_002355572.1 | diacylglycerol kinase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4065.93 Da Isoelectric Point: 5.9482
>T236667 WP_002355568.1 NZ_CP092576:676358-676474 [Enterococcus faecalis]
MFLSVEAALGLMIGFATLVVTIIFGILALVLDNKNNRS
MFLSVEAALGLMIGFATLVVTIIFGILALVLDNKNNRS
Download Length: 117 bp
>T236667 NZ_LR699114:904507-904911 [Aquicella lusitana]
ATGCGCTTAAGATATTTATTGGACACTAATATTTGTATTTATATAGCTAAGCAAAAGCCTGCAACAGTTATGAAGAAATT
TGAAGAGCTAGAAGTCGGACAAGTAGCAATGTCTGTTATTACCTATGGTGAACTTTTATATGGCGCTAATAAAAGTCAAT
CACCCGATGCTGCACATTCTAAACTAGTTGAACTAACCACGTTAATCCCTGCTTTAGAATTAAATAATGAAGTAGCTGAA
CATTATGGTGATATCAGAAGAAATTTAGAAAAATTTGGTAAACCAATTGGCAATAATGATCTTTGGATTGCATCGCATGC
ACGCGCATTAGATGTCATACTGGTTACAAATAATTTAAGGGAATTCGATAGAGTGCCAAAGTTAAGGATAGAGAATTGGG
TTTAA
ATGCGCTTAAGATATTTATTGGACACTAATATTTGTATTTATATAGCTAAGCAAAAGCCTGCAACAGTTATGAAGAAATT
TGAAGAGCTAGAAGTCGGACAAGTAGCAATGTCTGTTATTACCTATGGTGAACTTTTATATGGCGCTAATAAAAGTCAAT
CACCCGATGCTGCACATTCTAAACTAGTTGAACTAACCACGTTAATCCCTGCTTTAGAATTAAATAATGAAGTAGCTGAA
CATTATGGTGATATCAGAAGAAATTTAGAAAAATTTGGTAAACCAATTGGCAATAATGATCTTTGGATTGCATCGCATGC
ACGCGCATTAGATGTCATACTGGTTACAAATAATTTAAGGGAATTCGATAGAGTGCCAAAGTTAAGGATAGAGAATTGGG
TTTAA
Antitoxin
Download Length: 206 bp
>AT236667 NZ_CP092576:c676590-676385 [Enterococcus faecalis]
AAAAGAGAGATATGCAGGAACATACCTCTCTAATAGCCACTACCAGTTATAAGAACTGGTGGCTTACTGAGTTATTGGTT
TTATTTCAAACGCTTAACCGTTCAGCTCCTCAAAGCTTATGAACGGTTATTTTTGTTGTCTAAGACAAGCGCTAAGATAC
CGAAGATAATGGTCACAACAAGCGTTGCAAAACCAATCATCAGTCC
AAAAGAGAGATATGCAGGAACATACCTCTCTAATAGCCACTACCAGTTATAAGAACTGGTGGCTTACTGAGTTATTGGTT
TTATTTCAAACGCTTAACCGTTCAGCTCCTCAAAGCTTATGAACGGTTATTTTTGTTGTCTAAGACAAGCGCTAAGATAC
CGAAGATAATGGTCACAACAAGCGTTGCAAAACCAATCATCAGTCC
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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