Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 323620..323814 Replicon chromosome
Accession NZ_CP091899
Organism Enterococcus faecalis strain 101-1

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag L5I21_RS01640 Protein ID WP_015543884.1
Coordinates 323719..323814 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 323620..323684 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
L5I21_RS01625 319253..320995 + 1743 WP_002399652.1 PTS transporter subunit EIIC -
L5I21_RS01630 320986..323019 + 2034 WP_002387671.1 PRD domain-containing protein -
L5I21_RS01635 323030..323464 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- 323620..323684 + 65 - - Antitoxin
L5I21_RS01640 323719..323814 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
L5I21_RS01645 324060..325832 + 1773 WP_010706745.1 PTS mannitol-specific transporter subunit IIBC -
L5I21_RS01650 325847..326284 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
L5I21_RS01655 326299..327453 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
L5I21_RS01660 327520..328635 - 1116 WP_002379062.1 FAD-dependent oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type I toxin-antitoxin system, toxin Ldr

(1-35)


Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T235123 WP_015543884.1 NZ_CP091899:c323814-323719 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T235123 NZ_LR134216:2615694-2615801 [Escherichia coli]
ATGACGCTCGCGCAGTTTGCCATGACTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGGATTATTACCGCAGCGAT
TGTCAGCTGGTGGCGTAACCGGAAGTAA

Antitoxin


Download         Length: 65 bp

>AT235123 NZ_CP091899:323620-323684 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References