Detailed information of TA system TA233007

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): txpA-ratA/-
• Location: 2828004..2828341
• Replicon: chromosome
• Accession: NZ_CP091235
• Organism: Enterococcus faecalis strain 705

Toxin (Protein)

• Gene name: txpA
• Uniprot ID: A0A1J6YG70
• Locus tag: LQ054_RS13580
• Protein ID: WP_002396786.1
• Coordinates: 2828004..2828147 (+)
• Length: 48 a.a.

Antitoxin (RNA)

Gene name	ratA
Locus tag	-
Coordinates	2828079..2828341 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
LQ054_RS13560	2823220..2823435	-	216	WP_002354768.1	zinc ribbon domain-containing protein	-
LQ054_RS13565	2823574..2824566	+	993	WP_002378862.1	biotin--[acetyl-CoA-carboxylase] ligase	-
LQ054_RS13570	2824733..2825371	-	639	WP_002378863.1	lytic polysaccharide monooxygenase	-
LQ054_RS13575	2826056..2827672	+	1617	WP_002378864.1	phosphatase PAP2/LCP family protein	-
LQ054_RS13580	2828004..2828147	+	144	WP_002396786.1	putative holin-like toxin	Toxin
-	2828079..2828341	-	263	-	-	Antitoxin
LQ054_RS13585	2828342..2833033	-	4692	WP_116491824.1	WxL domain-containing protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Small toxic protein BsrE-like (14-47)

Sequences

Toxin

Protein

• Length: 48 a.a.
• Molecular weight: 5203.19 Da
• Isoelectric Point: 8.6626

>T233007 WP_002396786.1 NZ_CP091235:2828004-2828147 [Enterococcus faecalis]
MNVSTKIYERRGLLSIAEALALMISFGSFIATLIFGILEAVKEDNKK

Nucleotide

• Length: 144 bp

>T233007 NZ_CP128516:c944919-944737 [Mannheimia haemolytica]
ATGAAATACAGCGAGTTCCTGAGGTACTTACTTGCTCAAGGTTGCGAAATTGAAAACCATAGGCGAGGCAGTCATCGAAA
GGTAACACTAAACGGAAAACAATCGGTTTTTCCTTATCACGGGAGCAAAGAGATTGGTACAGGTTTAGTAAATAAGATTA
AGAAAGACTTAGATCTTAAATAA

Antitoxin

Nucleotide

• Length: 263 bp

>AT233007 NZ_CP091235:c2828341-2828079 [Enterococcus faecalis]
AAATAAAAATGCCCGAGCCTCTTATTTTTCTAAGGCTCGGGCATTTTTATTGATGGTCTTTTGAGGGTCGTTGTGCTATA
ATGGTAATGAAAAGAGAGGTATGCGCCAACATACCTCTCTAGTGTAGAGCCGTTTCAGACGGTAGCGATTTTTAGTGATT
TATAAAAAATAACCGTGCTCGCTAAAGTTGACGGTTATTTTTTATTGTCTTCTTTAACAGCCTCTAGGATTCCGAAGATT
AACGTTGCGATAAAAGAACCGAA

Structures

Toxin

• AlphaFold DB: A0A1J6YG70

Antitoxin