Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | txpA-ratA/- |
Location | 2715365..2715585 | Replicon | chromosome |
Accession | NZ_CP091231 | ||
Organism | Enterococcus faecalis strain 732 |
Toxin (Protein)
Gene name | txpA | Uniprot ID | - |
Locus tag | LQ055_RS13475 | Protein ID | WP_021164441.1 |
Coordinates | 2715484..2715585 (-) | Length | 34 a.a. |
Antitoxin (RNA)
Gene name | ratA | ||
Locus tag | - | ||
Coordinates | 2715365..2715539 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LQ055_RS13450 | 2711012..2711965 | - | 954 | WP_002370087.1 | siderophore ABC transporter substrate-binding protein | - |
LQ055_RS13455 | 2712004..2712759 | - | 756 | WP_002354962.1 | ATP-binding cassette domain-containing protein | - |
LQ055_RS13460 | 2712756..2713721 | - | 966 | WP_002371665.1 | iron chelate uptake ABC transporter family permease subunit | - |
LQ055_RS13465 | 2713718..2714665 | - | 948 | WP_002354960.1 | iron chelate uptake ABC transporter family permease subunit | - |
LQ055_RS13470 | 2714850..2715302 | + | 453 | WP_002389410.1 | YueI family protein | - |
- | 2715365..2715539 | + | 175 | - | - | Antitoxin |
LQ055_RS13475 | 2715484..2715585 | - | 102 | WP_021164441.1 | putative holin-like toxin | Toxin |
LQ055_RS13480 | 2715917..2716018 | - | 102 | WP_075551663.1 | putative holin-like toxin | - |
LQ055_RS13485 | 2716208..2718478 | - | 2271 | WP_002389492.1 | bifunctional glutamate--cysteine ligase/glutathione synthetase | - |
LQ055_RS13490 | 2718649..2719149 | + | 501 | WP_002372831.1 | cysteine hydrolase family protein | - |
LQ055_RS13495 | 2719548..2720444 | + | 897 | WP_002389477.1 | YitT family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 34 a.a. Molecular weight: 3598.36 Da Isoelectric Point: 6.0656
>T232967 WP_021164441.1 NZ_CP091231:c2715585-2715484 [Enterococcus faecalis]
MSIEAALELMISFAAFVALLIFGILEATKNNKK
MSIEAALELMISFAAFVALLIFGILEATKNNKK
Download Length: 102 bp
>T232967 NZ_CP128506:c158965-158684 [Pseudomonas aeruginosa]
ATGAGCCTGAAGTGGACCCGCAAAGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGA
AAAAGCTCTGAAAGCCGTTCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGC
CCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCGTTTCGGGTTAAAGGCAAGGAA
ATCCAGATTTTGCGCATCGACAGGGTCGAAATTACCCCCTGA
ATGAGCCTGAAGTGGACCCGCAAAGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGA
AAAAGCTCTGAAAGCCGTTCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGC
CCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCGTTTCGGGTTAAAGGCAAGGAA
ATCCAGATTTTGCGCATCGACAGGGTCGAAATTACCCCCTGA
Antitoxin
Download Length: 175 bp
>AT232967 NZ_CP091231:2715365-2715539 [Enterococcus faecalis]
AAAAGAGAGGTATGCGGGTACATACCTCTCCTTTTATACCAACACCAGTTATAAGAACTGGTGGCTTACTGAGTTAAGTT
TTGAATCTTAACCGTTCGGCCTACGAAGCTTGTGAACGGTTATTTTTTATTGTTTTTCGTTGCTTCAAGGATACCGAAAA
TCAGTAGTGCAACAA
AAAAGAGAGGTATGCGGGTACATACCTCTCCTTTTATACCAACACCAGTTATAAGAACTGGTGGCTTACTGAGTTAAGTT
TTGAATCTTAACCGTTCGGCCTACGAAGCTTGTGAACGGTTATTTTTTATTGTTTTTCGTTGCTTCAAGGATACCGAAAA
TCAGTAGTGCAACAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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