232967

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2715365..2715585 Replicon chromosome
Accession NZ_CP091231
Organism Enterococcus faecalis strain 732

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag LQ055_RS13475 Protein ID WP_021164441.1
Coordinates 2715484..2715585 (-) Length 34 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2715365..2715539 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LQ055_RS13450 2711012..2711965 - 954 WP_002370087.1 siderophore ABC transporter substrate-binding protein -
LQ055_RS13455 2712004..2712759 - 756 WP_002354962.1 ATP-binding cassette domain-containing protein -
LQ055_RS13460 2712756..2713721 - 966 WP_002371665.1 iron chelate uptake ABC transporter family permease subunit -
LQ055_RS13465 2713718..2714665 - 948 WP_002354960.1 iron chelate uptake ABC transporter family permease subunit -
LQ055_RS13470 2714850..2715302 + 453 WP_002389410.1 YueI family protein -
- 2715365..2715539 + 175 - - Antitoxin
LQ055_RS13475 2715484..2715585 - 102 WP_021164441.1 putative holin-like toxin Toxin
LQ055_RS13480 2715917..2716018 - 102 WP_075551663.1 putative holin-like toxin -
LQ055_RS13485 2716208..2718478 - 2271 WP_002389492.1 bifunctional glutamate--cysteine ligase/glutathione synthetase -
LQ055_RS13490 2718649..2719149 + 501 WP_002372831.1 cysteine hydrolase family protein -
LQ055_RS13495 2719548..2720444 + 897 WP_002389477.1 YitT family protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(1-33)


Sequences


Toxin        


Download         Length: 34 a.a.        Molecular weight: 3598.36 Da        Isoelectric Point: 6.0656

>T232967 WP_021164441.1 NZ_CP091231:c2715585-2715484 [Enterococcus faecalis]
MSIEAALELMISFAAFVALLIFGILEATKNNKK

Download         Length: 102 bp

>T232967 NZ_CP128506:c158965-158684 [Pseudomonas aeruginosa]
ATGAGCCTGAAGTGGACCCGCAAAGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGA
AAAAGCTCTGAAAGCCGTTCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGC
CCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCGTTTCGGGTTAAAGGCAAGGAA
ATCCAGATTTTGCGCATCGACAGGGTCGAAATTACCCCCTGA

Antitoxin


Download         Length: 175 bp

>AT232967 NZ_CP091231:2715365-2715539 [Enterococcus faecalis]
AAAAGAGAGGTATGCGGGTACATACCTCTCCTTTTATACCAACACCAGTTATAAGAACTGGTGGCTTACTGAGTTAAGTT
TTGAATCTTAACCGTTCGGCCTACGAAGCTTGTGAACGGTTATTTTTTATTGTTTTTCGTTGCTTCAAGGATACCGAAAA
TCAGTAGTGCAACAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References