Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | txpA-ratA/- |
Location | 2720678..2721014 | Replicon | chromosome |
Accession | NZ_CP090558 | ||
Organism | Enterococcus faecalis strain PCH555 |
Toxin (Protein)
Gene name | txpA | Uniprot ID | - |
Locus tag | LZP99_RS13010 | Protein ID | WP_104866227.1 |
Coordinates | 2720678..2720821 (+) | Length | 48 a.a. |
Antitoxin (RNA)
Gene name | ratA | ||
Locus tag | - | ||
Coordinates | 2720965..2721014 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LZP99_RS12995 | 2716394..2717026 | - | 633 | WP_002358972.1 | RloB family protein | - |
LZP99_RS13000 | 2717035..2718330 | - | 1296 | WP_104866226.1 | ATP-binding protein | - |
LZP99_RS13005 | 2718792..2720408 | + | 1617 | WP_002365430.1 | phosphatase PAP2/LCP family protein | - |
LZP99_RS13010 | 2720678..2720821 | + | 144 | WP_104866227.1 | putative holin-like toxin | Toxin |
- | 2720965..2721014 | + | 50 | - | - | Antitoxin |
LZP99_RS13015 | 2721016..2725707 | - | 4692 | WP_104866228.1 | WxL domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 48 a.a. Molecular weight: 5189.20 Da Isoelectric Point: 8.6389
>T231204 WP_104866227.1 NZ_CP090558:2720678-2720821 [Enterococcus faecalis]
MNVSTKIYEKRGLLSIAEALALMISFGSFIATLIFGILEAVKEENKK
MNVSTKIYEKRGLLSIAEALALMISFGSFIATLIFGILEAVKEENKK
Download Length: 144 bp
>T231204 NZ_CP126138:3694215-3694490 [Salmonella enterica subsp. enterica serovar Kottbus]
ATGAATGCCTCCGGCGTCAGCGTCCGCCATATCAACAGCGAAACCTGCATGACCGCCTGTTACTCACAAATCCCCAGCCA
GCACCTTAAGGGTGACTGGCAGGAAGAAGCGGGATTTGAGACCGGGCACGGCGTCACCGTGAAGATCTCCGAGGGGTGTT
TGATCCTGATTGCAGAGACGGACGAAGTGAGGGATCTACGGAAGGAGCTTTATCAGGTGAAAAAGTCGATGAAGCATATT
AAGGCGGGGGTAAATAATGTGGTGAACGGGGATTAA
ATGAATGCCTCCGGCGTCAGCGTCCGCCATATCAACAGCGAAACCTGCATGACCGCCTGTTACTCACAAATCCCCAGCCA
GCACCTTAAGGGTGACTGGCAGGAAGAAGCGGGATTTGAGACCGGGCACGGCGTCACCGTGAAGATCTCCGAGGGGTGTT
TGATCCTGATTGCAGAGACGGACGAAGTGAGGGATCTACGGAAGGAGCTTTATCAGGTGAAAAAGTCGATGAAGCATATT
AAGGCGGGGGTAAATAATGTGGTGAACGGGGATTAA
Antitoxin
Download Length: 50 bp
>AT231204 NZ_CP090558:2720965-2721014 [Enterococcus faecalis]
AATAAAAATGCCCGAGCCTTAGAAAAATAAGAGGCTCGGTCATTTTTATT
AATAAAAATGCCCGAGCCTTAGAAAAATAAGAGGCTCGGTCATTTTTATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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