Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | fst-RNAII/- |
Location | 343776..343970 | Replicon | chromosome |
Accession | NZ_CP090558 | ||
Organism | Enterococcus faecalis strain PCH555 |
Toxin (Protein)
Gene name | fst | Uniprot ID | - |
Locus tag | LZP99_RS01780 | Protein ID | WP_015543884.1 |
Coordinates | 343875..343970 (-) | Length | 32 a.a. |
Antitoxin (RNA)
Gene name | RNAII | ||
Locus tag | - | ||
Coordinates | 343776..343840 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LZP99_RS01765 | 339394..341136 | + | 1743 | WP_174094296.1 | PTS transporter subunit EIIC | - |
LZP99_RS01770 | 341127..343160 | + | 2034 | WP_002355275.1 | BglG family transcription antiterminator | - |
LZP99_RS01775 | 343171..343605 | + | 435 | WP_002358391.1 | PTS sugar transporter subunit IIA | - |
- | 343776..343840 | + | 65 | - | - | Antitoxin |
LZP99_RS01780 | 343875..343970 | - | 96 | WP_015543884.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
LZP99_RS01785 | 344216..345988 | + | 1773 | WP_002391520.1 | PTS mannitol-specific transporter subunit IIBC | - |
LZP99_RS01790 | 346003..346440 | + | 438 | WP_002355279.1 | PTS sugar transporter subunit IIA | - |
LZP99_RS01795 | 346455..347609 | + | 1155 | WP_002355280.1 | mannitol-1-phosphate 5-dehydrogenase | - |
LZP99_RS01800 | 347678..348793 | - | 1116 | WP_002364956.1 | FAD-dependent oxidoreductase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 32 a.a. Molecular weight: 3659.47 Da Isoelectric Point: 4.6275
>T231191 WP_015543884.1 NZ_CP090558:c343970-343875 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE
Download Length: 96 bp
>T231191 NZ_CP126126:4018346-4018915 [Pseudomonas sp. SO81]
ATGTTCAAGCCTCAACCCGTCGCCCTGCAGCAGGGGGCCCTGCGCCTCGACCCGCTGAGCGAGAGCGATCTGCCGGGCCT
GCTGGAATTGGCCGAGGCCAACCGCGAGTCCCAGCAGTACATGAGCGGCACCACGCGCCCGGACTGGTACCGCAACGCCC
TGGCCGAGCAGCGCGAGGGCCGCGAGGTGGTGTTCGCCATCCGCCTGGCCGGCGAGCTGGTCGGCACCACCAGCTTCTTC
GACTTCAATCCGGTGCTGCCGGCCGCCGAGATCGGCGCGACCTGGCTGGACGCCCGCCAGCACGGTACCGGCCTCAACCG
CATGATCAAGTACCTGATGCTGCGCCACGCCTTCGAGGAGTGGCAGCTGGTGCGCGTGCAGCTGAAGACCGCCGCCAGCA
ACCTGCGCTCGCAGCGCGCCATCGAGAAGCTCGGTGCCCAGCGCGAGGGGCTGCTGCGCAACCACCGGCGCCTGGCCGAT
GGCCGTCTCGATCACACCGTGATGTATAGCATCACCGACAGCGAGTGGCCGCAGGTCAAGGCCGGTCTGGAGGCGCGCTT
CGGCGCGTGA
ATGTTCAAGCCTCAACCCGTCGCCCTGCAGCAGGGGGCCCTGCGCCTCGACCCGCTGAGCGAGAGCGATCTGCCGGGCCT
GCTGGAATTGGCCGAGGCCAACCGCGAGTCCCAGCAGTACATGAGCGGCACCACGCGCCCGGACTGGTACCGCAACGCCC
TGGCCGAGCAGCGCGAGGGCCGCGAGGTGGTGTTCGCCATCCGCCTGGCCGGCGAGCTGGTCGGCACCACCAGCTTCTTC
GACTTCAATCCGGTGCTGCCGGCCGCCGAGATCGGCGCGACCTGGCTGGACGCCCGCCAGCACGGTACCGGCCTCAACCG
CATGATCAAGTACCTGATGCTGCGCCACGCCTTCGAGGAGTGGCAGCTGGTGCGCGTGCAGCTGAAGACCGCCGCCAGCA
ACCTGCGCTCGCAGCGCGCCATCGAGAAGCTCGGTGCCCAGCGCGAGGGGCTGCTGCGCAACCACCGGCGCCTGGCCGAT
GGCCGTCTCGATCACACCGTGATGTATAGCATCACCGACAGCGAGTGGCCGCAGGTCAAGGCCGGTCTGGAGGCGCGCTT
CGGCGCGTGA
Antitoxin
Download Length: 65 bp
>AT231191 NZ_CP090558:343776-343840 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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