Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) fst-RNAII/-
Location 343776..343970 Replicon chromosome
Accession NZ_CP090558
Organism Enterococcus faecalis strain PCH555

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag LZP99_RS01780 Protein ID WP_015543884.1
Coordinates 343875..343970 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 343776..343840 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LZP99_RS01765 339394..341136 + 1743 WP_174094296.1 PTS transporter subunit EIIC -
LZP99_RS01770 341127..343160 + 2034 WP_002355275.1 BglG family transcription antiterminator -
LZP99_RS01775 343171..343605 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- 343776..343840 + 65 - - Antitoxin
LZP99_RS01780 343875..343970 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
LZP99_RS01785 344216..345988 + 1773 WP_002391520.1 PTS mannitol-specific transporter subunit IIBC -
LZP99_RS01790 346003..346440 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
LZP99_RS01795 346455..347609 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
LZP99_RS01800 347678..348793 - 1116 WP_002364956.1 FAD-dependent oxidoreductase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T231191 WP_015543884.1 NZ_CP090558:c343970-343875 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T231191 NZ_CP126126:4018346-4018915 [Pseudomonas sp. SO81]
ATGTTCAAGCCTCAACCCGTCGCCCTGCAGCAGGGGGCCCTGCGCCTCGACCCGCTGAGCGAGAGCGATCTGCCGGGCCT
GCTGGAATTGGCCGAGGCCAACCGCGAGTCCCAGCAGTACATGAGCGGCACCACGCGCCCGGACTGGTACCGCAACGCCC
TGGCCGAGCAGCGCGAGGGCCGCGAGGTGGTGTTCGCCATCCGCCTGGCCGGCGAGCTGGTCGGCACCACCAGCTTCTTC
GACTTCAATCCGGTGCTGCCGGCCGCCGAGATCGGCGCGACCTGGCTGGACGCCCGCCAGCACGGTACCGGCCTCAACCG
CATGATCAAGTACCTGATGCTGCGCCACGCCTTCGAGGAGTGGCAGCTGGTGCGCGTGCAGCTGAAGACCGCCGCCAGCA
ACCTGCGCTCGCAGCGCGCCATCGAGAAGCTCGGTGCCCAGCGCGAGGGGCTGCTGCGCAACCACCGGCGCCTGGCCGAT
GGCCGTCTCGATCACACCGTGATGTATAGCATCACCGACAGCGAGTGGCCGCAGGTCAAGGCCGGTCTGGAGGCGCGCTT
CGGCGCGTGA

Antitoxin


Download         Length: 65 bp

>AT231191 NZ_CP090558:343776-343840 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References