Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 646921..647653 Replicon chromosome
Accession NC_011027
Organism Chlorobaculum parvum NCIB 8327

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag CPAR_RS03080 Protein ID WP_012501855.1
Coordinates 647345..647653 (-) Length 103 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag CPAR_RS03075 Protein ID WP_041466111.1
Coordinates 646921..647331 (-) Length 137 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CPAR_RS03060 642213..645671 + 3459 WP_012501851.1 vitamin B12-dependent ribonucleotide reductase -
CPAR_RS03065 645908..646189 + 282 WP_012501852.1 hypothetical protein -
CPAR_RS03070 646189..646662 + 474 WP_012501853.1 hypothetical protein -
CPAR_RS03075 646921..647331 - 411 WP_041466111.1 type II toxin-antitoxin system MqsA family antitoxin Antitoxin
CPAR_RS03080 647345..647653 - 309 WP_012501855.1 type II toxin-antitoxin system MqsR family toxin Toxin
CPAR_RS03085 648066..648527 + 462 WP_012501856.1 hypothetical protein -
CPAR_RS10950 648637..649440 + 804 WP_198002630.1 cache domain-containing protein -
CPAR_RS03095 649442..649888 + 447 WP_012501858.1 nucleoside deaminase -
CPAR_RS03100 649949..650593 + 645 WP_012501859.1 hypothetical protein -
CPAR_RS03105 650650..650997 + 348 WP_156773459.1 DUF4878 domain-containing protein -
CPAR_RS03110 651106..651825 - 720 WP_012501861.1 ATP-binding cassette domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-100)

Antitoxin

Antitoxin MqsA

(8-133)


Sequences

Toxin        


Download         Length: 103 a.a.        Molecular weight: 11810.71 Da        Isoelectric Point: 10.0567

>T22971 WP_012501855.1 NC_011027:c647653-647345 [Chlorobaculum parvum NCIB 8327]
MEKRKPHYQLEKVQGIVADRNSRPFTMTALRGGLALGLTEPVMREVVLALRRVDFYKSMTTHRDHQLWQDVYHGMTPDGV
PVYIKITGFDDDRPPVIQFKAK

Download         Length: 309 bp

>T22971 NC_011027:c647653-647345 [Chlorobaculum parvum NCIB 8327]
ATGGAGAAAAGAAAACCTCATTATCAACTTGAGAAGGTTCAAGGAATAGTCGCTGACAGAAATTCACGGCCATTTACGAT
GACGGCGTTGAGAGGTGGTTTGGCATTGGGATTGACGGAGCCCGTTATGCGAGAAGTTGTGCTTGCGCTCCGGAGAGTCG
ACTTTTACAAGTCGATGACAACTCATCGAGACCATCAGCTTTGGCAGGATGTATATCACGGAATGACACCCGATGGAGTT
CCGGTTTATATCAAAATAACCGGCTTTGACGATGACCGCCCGCCGGTGATCCAGTTCAAGGCCAAATGA

Antitoxin


Download         Length: 137 a.a.        Molecular weight: 15329.82 Da        Isoelectric Point: 8.4905

>AT22971 WP_041466111.1 NC_011027:c647331-646921 [Chlorobaculum parvum NCIB 8327]
VIMNTKKCPSCGHSGMIDKVLEETLTYGGKSMTLHDMHGQFCPECGEGIWDEESYRRYTEAQEGLVRAIKGDPAADIRRI
RRKLKLTQAQLAISFGVGKVAFSRYERGETKPPAPLLKLLKLIDRHPDLLAEIEKM

Download         Length: 411 bp

>AT22971 NC_011027:c647331-646921 [Chlorobaculum parvum NCIB 8327]
GTGATTATGAATACGAAGAAATGTCCCTCATGCGGTCACAGCGGTATGATCGACAAGGTTTTGGAGGAAACGCTCACGTA
TGGCGGTAAATCGATGACGCTGCATGATATGCACGGCCAGTTCTGCCCGGAGTGTGGCGAAGGGATTTGGGATGAAGAGA
GTTACCGGCGCTACACAGAGGCTCAGGAGGGGCTGGTACGAGCAATCAAAGGCGACCCGGCAGCAGACATCCGGCGAATC
CGCAGAAAACTGAAACTGACACAGGCGCAACTCGCCATATCGTTCGGCGTCGGCAAGGTCGCGTTTTCACGTTACGAGCG
TGGAGAAACCAAACCTCCCGCACCACTGCTCAAGTTGCTGAAACTCATCGACCGGCATCCGGATTTGCTAGCGGAGATTG
AGAAGATGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References