226913

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2543633..2543904 Replicon chromosome
Accession NZ_CP088198
Organism Enterococcus faecalis strain S11-6

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag LQ046_RS11925 Protein ID WP_002375510.1
Coordinates 2543752..2543904 (-) Length 51 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2543633..2543819 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LQ046_RS11910 (2539600) 2539600..2542344 + 2745 WP_104807179.1 glycosyl hydrolase family 65 protein -
LQ046_RS11915 (2542359) 2542359..2543009 + 651 WP_002375514.1 beta-phosphoglucomutase -
- (2543078) 2543078..2543210 + 133 NuclAT_12 - -
- (2543257) 2543257..2543444 + 188 NuclAT_4 - -
LQ046_RS11920 (2543377) 2543377..2543481 - 105 WP_023894767.1 putative holin-like toxin -
- (2543633) 2543633..2543778 + 146 NuclAT_11 - -
- (2543633) 2543633..2543819 + 187 NuclAT_5 - Antitoxin
LQ046_RS11925 (2543752) 2543752..2543904 - 153 WP_002375510.1 type I toxin-antitoxin system toxin PepG1 Toxin
LQ046_RS11930 (2544129) 2544129..2545100 - 972 WP_002381060.1 ribose-phosphate diphosphokinase -
LQ046_RS11935 (2545275) 2545275..2545712 - 438 WP_002354871.1 peptide-methionine (R)-S-oxide reductase MsrB -
LQ046_RS11940 (2545845) 2545845..2546399 - 555 WP_002354869.1 Maf family protein -
LQ046_RS11945 (2546424) 2546424..2548556 - 2133 WP_002375508.1 DNA mismatch repair endonuclease MutL -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(17-50)


Sequences


Toxin        


Download         Length: 51 a.a.        Molecular weight: 5637.90 Da        Isoelectric Point: 11.0942

>T226913 WP_002375510.1 NZ_CP088198:c2543904-2543752 [Enterococcus faecalis]
VVRMSALPKFTERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 153 bp

>T226913 NZ_CP122652:c4819594-4819283 [Escherichia coli]
ATGCTCTTCATCGAAACGGAAATTTTTACTGAAGATGTTCAAAAACTGCTGACCGACGATGAATTCAGTCGTTTTCAGTT
TTTCCTGGCCTTGAATCCTGACTATGGTGAGGTAATACCTGAAACTGGTGGGTTAAGAAAGGTTCGATGGGTGTCAGGAG
GAAAGGGGAAACGTGCTGGTGTCAGGGTTATTTACTTTCATCAGGTTAAACATTATGAGATCAGATTACTGCTTATTTAT
CGTAAGGGTATTAAAGATGATCTGTCTCCCCAGGAAAAAGCAATGCTCCGGTTGTTAAATACGAGGTGGTAA

Antitoxin


Download         Length: 187 bp

>AT226913 NZ_CP088198:2543633-2543819 [Enterococcus faecalis]
TGTGCTATAATGAAAATGAAAAGAGAGATATGAGTCAACATACCTCTCTAGTGTAGAGCCGTTTGAGACGGTGACCGATT
GTATTATTTAAAAATAACCGTACTGGTCAAAGTAGACGGTTATTTTTTTTTGTCATTTTTAAGCAATTTCACAATCAGTG
CAATCAAAGCAATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References