Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | txpA-ratA/- |
Location | 2464736..2464960 | Replicon | chromosome |
Accession | NZ_CP088198 | ||
Organism | Enterococcus faecalis strain S11-6 |
Toxin (Protein)
Gene name | txpA | Uniprot ID | - |
Locus tag | LQ046_RS11555 | Protein ID | WP_162780856.1 |
Coordinates | 2464859..2464960 (-) | Length | 34 a.a. |
Antitoxin (RNA)
Gene name | ratA | ||
Locus tag | - | ||
Coordinates | 2464736..2464922 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
LQ046_RS11530 (2460354) | 2460354..2461307 | - | 954 | WP_002375576.1 | siderophore ABC transporter substrate-binding protein | - |
LQ046_RS11535 (2461346) | 2461346..2462101 | - | 756 | WP_002375575.1 | ATP-binding cassette domain-containing protein | - |
LQ046_RS11540 (2462098) | 2462098..2463063 | - | 966 | WP_002371665.1 | iron chelate uptake ABC transporter family permease subunit | - |
LQ046_RS11545 (2463060) | 2463060..2464007 | - | 948 | WP_002375573.1 | iron chelate uptake ABC transporter family permease subunit | - |
LQ046_RS11550 (2464191) | 2464191..2464643 | + | 453 | WP_002375572.1 | YueI family protein | - |
- (2464699) | 2464699..2464905 | + | 207 | NuclAT_7 | - | - |
- (2464736) | 2464736..2464922 | + | 187 | NuclAT_9 | - | Antitoxin |
LQ046_RS11555 (2464859) | 2464859..2464960 | - | 102 | WP_162780856.1 | putative holin-like toxin | Toxin |
LQ046_RS11560 (2465152) | 2465152..2467422 | - | 2271 | WP_002368430.1 | bifunctional glutamate--cysteine ligase/glutathione synthetase | - |
LQ046_RS11565 (2467593) | 2467593..2468093 | + | 501 | WP_002395960.1 | cysteine hydrolase family protein | - |
LQ046_RS11570 (2468892) | 2468892..2469788 | + | 897 | WP_002368434.1 | YitT family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 34 a.a. Molecular weight: 3624.40 Da Isoelectric Point: 6.0656
>T226905 WP_162780856.1 NZ_CP088198:c2464960-2464859 [Enterococcus faecalis]
MSIEATLELMISFATLVALLIFGILEATKNNKK
MSIEATLELMISFATLVALLIFGILEATKNNKK
Download Length: 102 bp
>T226905 NZ_CP122652:2904824-2904931 [Escherichia coli]
ATGACGCTCGCGCAGTTTGCCGTGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGAT
TGTCAGCTGGTGGCGTAACCGGAAGTAA
ATGACGCTCGCGCAGTTTGCCGTGATTTTCTGGCACGACCTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGAT
TGTCAGCTGGTGGCGTAACCGGAAGTAA
Antitoxin
Download Length: 187 bp
>AT226905 NZ_CP088198:2464736-2464922 [Enterococcus faecalis]
AAAAGAGAGGTATGCGGGTACATACCTCTCCTTTATACCAGCGCCAGTTATAAGAACTGGTGGCTTACTGAGTTAAGTTT
TTTATTACTGTTTAACCGTTCGGCCTGTCAAGCTTATGAACGGTTATTTTTTATTGTTTTTCGTTGCTTCAAGGATACCG
AAAATCAGTAACGCAACAAGGGTTGCA
AAAAGAGAGGTATGCGGGTACATACCTCTCCTTTATACCAGCGCCAGTTATAAGAACTGGTGGCTTACTGAGTTAAGTTT
TTTATTACTGTTTAACCGTTCGGCCTGTCAAGCTTATGAACGGTTATTTTTTATTGTTTTTCGTTGCTTCAAGGATACCG
AAAATCAGTAACGCAACAAGGGTTGCA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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