Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 312399..312593 Replicon chromosome
Accession NZ_CP088198
Organism Enterococcus faecalis strain S11-6

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag LQ046_RS01540 Protein ID WP_015543884.1
Coordinates 312498..312593 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 312399..312463 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
LQ046_RS01525 (308024) 308024..309772 + 1749 WP_181033811.1 PTS transporter subunit EIIC -
LQ046_RS01530 (309763) 309763..311796 + 2034 WP_002383677.1 BglG family transcription antiterminator -
LQ046_RS01535 (311807) 311807..312241 + 435 WP_104807259.1 PTS sugar transporter subunit IIA -
- (312399) 312399..312463 + 65 NuclAT_14 - Antitoxin
LQ046_RS01540 (312498) 312498..312593 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
LQ046_RS01545 (312839) 312839..314611 + 1773 WP_104807258.1 PTS mannitol-specific transporter subunit IIBC -
LQ046_RS01550 (314626) 314626..315063 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
LQ046_RS01555 (315078) 315078..316232 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
LQ046_RS01560 (316301) 316301..317416 - 1116 WP_104807257.1 FAD-dependent oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T226900 WP_015543884.1 NZ_CP088198:c312593-312498 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T226900 NZ_CP122652:1982697-1982951 [Escherichia coli]
GTGAAACTAATCTGGTCTGAGGAGTCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACACCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA

Antitoxin


Download         Length: 65 bp

>AT226900 NZ_CP088198:312399-312463 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGCAGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References