214413

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 2655127..2655569 Replicon chromosome
Accession NZ_CP082231
Organism Enterococcus faecalis strain E006

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag K4200_RS12985 Protein ID WP_023894767.1
Coordinates 2655127..2655231 (-) Length 35 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 2655371..2655569 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
K4200_RS12970 2650373..2651086 - 714 WP_002354877.1 trehalose operon repressor -
K4200_RS12975 2651348..2654092 + 2745 WP_070416068.1 glycosyl hydrolase family 65 protein -
K4200_RS12980 2654107..2654757 + 651 WP_002354875.1 beta-phosphoglucomutase -
K4200_RS12985 2655127..2655231 - 105 WP_023894767.1 putative holin-like toxin Toxin
- 2655371..2655569 + 199 - - Antitoxin
K4200_RS12990 2655502..2655645 - 144 WP_002392696.1 type I toxin-antitoxin system toxin PepG1 -
K4200_RS12995 2655876..2656847 - 972 WP_002381060.1 ribose-phosphate diphosphokinase -
K4200_RS13000 2657022..2657459 - 438 WP_002354871.1 peptide-methionine (R)-S-oxide reductase MsrB -
K4200_RS13005 2657592..2658146 - 555 WP_002354869.1 Maf family protein -
K4200_RS13010 2658171..2660303 - 2133 WP_070416067.1 DNA mismatch repair endonuclease MutL -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(1-34)


Sequences


Toxin        


Download         Length: 35 a.a.        Molecular weight: 3799.63 Da        Isoelectric Point: 10.0079

>T214413 WP_023894767.1 NZ_CP082231:c2655231-2655127 [Enterococcus faecalis]
MSAYETIQTILGFGMFTIALIALIVKLLKNDNKK

Download         Length: 105 bp

>T214413 NZ_CP110069:c2647588-2647487 [Enterococcus faecalis]
TTGTCAATCGAAGCGGCATTGGAATTGATGATTAGTTTTGCAGCGTTTGTTGCACTACTGATTTTCGGTATCCTTGAAGC
AACGAAAAACGATAAAAAATAA

Antitoxin


Download         Length: 199 bp

>AT214413 NZ_CP082231:2655371-2655569 [Enterococcus faecalis]
TTTTTAGGGAAATGTGCTATAATGAAAACGAAAAGAGAGATATGCTTCAACATACCTCTCTGATGTAGAGCCGTTTAAGA
CGGTGACCGATTGTATTATTTAAAAATAACCGTACTGGTCAAAGTAGACGGTTATTTTTTATTGTCATTTTTAAGCAATT
TCACAATCAGTGCAATCAAAGCAATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References