Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | txpA-ratA/- |
Location | 2655127..2655569 | Replicon | chromosome |
Accession | NZ_CP082231 | ||
Organism | Enterococcus faecalis strain E006 |
Toxin (Protein)
Gene name | txpA | Uniprot ID | - |
Locus tag | K4200_RS12985 | Protein ID | WP_023894767.1 |
Coordinates | 2655127..2655231 (-) | Length | 35 a.a. |
Antitoxin (RNA)
Gene name | ratA | ||
Locus tag | - | ||
Coordinates | 2655371..2655569 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K4200_RS12970 | 2650373..2651086 | - | 714 | WP_002354877.1 | trehalose operon repressor | - |
K4200_RS12975 | 2651348..2654092 | + | 2745 | WP_070416068.1 | glycosyl hydrolase family 65 protein | - |
K4200_RS12980 | 2654107..2654757 | + | 651 | WP_002354875.1 | beta-phosphoglucomutase | - |
K4200_RS12985 | 2655127..2655231 | - | 105 | WP_023894767.1 | putative holin-like toxin | Toxin |
- | 2655371..2655569 | + | 199 | - | - | Antitoxin |
K4200_RS12990 | 2655502..2655645 | - | 144 | WP_002392696.1 | type I toxin-antitoxin system toxin PepG1 | - |
K4200_RS12995 | 2655876..2656847 | - | 972 | WP_002381060.1 | ribose-phosphate diphosphokinase | - |
K4200_RS13000 | 2657022..2657459 | - | 438 | WP_002354871.1 | peptide-methionine (R)-S-oxide reductase MsrB | - |
K4200_RS13005 | 2657592..2658146 | - | 555 | WP_002354869.1 | Maf family protein | - |
K4200_RS13010 | 2658171..2660303 | - | 2133 | WP_070416067.1 | DNA mismatch repair endonuclease MutL | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 35 a.a. Molecular weight: 3799.63 Da Isoelectric Point: 10.0079
>T214413 WP_023894767.1 NZ_CP082231:c2655231-2655127 [Enterococcus faecalis]
MSAYETIQTILGFGMFTIALIALIVKLLKNDNKK
MSAYETIQTILGFGMFTIALIALIVKLLKNDNKK
Download Length: 105 bp
>T214413 NZ_CP110069:c2647588-2647487 [Enterococcus faecalis]
TTGTCAATCGAAGCGGCATTGGAATTGATGATTAGTTTTGCAGCGTTTGTTGCACTACTGATTTTCGGTATCCTTGAAGC
AACGAAAAACGATAAAAAATAA
TTGTCAATCGAAGCGGCATTGGAATTGATGATTAGTTTTGCAGCGTTTGTTGCACTACTGATTTTCGGTATCCTTGAAGC
AACGAAAAACGATAAAAAATAA
Antitoxin
Download Length: 199 bp
>AT214413 NZ_CP082231:2655371-2655569 [Enterococcus faecalis]
TTTTTAGGGAAATGTGCTATAATGAAAACGAAAAGAGAGATATGCTTCAACATACCTCTCTGATGTAGAGCCGTTTAAGA
CGGTGACCGATTGTATTATTTAAAAATAACCGTACTGGTCAAAGTAGACGGTTATTTTTTATTGTCATTTTTAAGCAATT
TCACAATCAGTGCAATCAAAGCAATGGTAAACATACCAA
TTTTTAGGGAAATGTGCTATAATGAAAACGAAAAGAGAGATATGCTTCAACATACCTCTCTGATGTAGAGCCGTTTAAGA
CGGTGACCGATTGTATTATTTAAAAATAACCGTACTGGTCAAAGTAGACGGTTATTTTTTATTGTCATTTTTAAGCAATT
TCACAATCAGTGCAATCAAAGCAATGGTAAACATACCAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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