Detailed information of TA system
Overview
TA module
Type | I | Classification (family/domain) | sprA1-sprA1AS/- |
Location | 2002311..2002491 | Replicon | chromosome |
Accession | NZ_CP080562 | ||
Organism | Staphylococcus aureus strain HL21008 |
Toxin (Protein)
Gene name | sprA1 | Uniprot ID | - |
Locus tag | JMO08_RS09835 | Protein ID | WP_001801861.1 |
Coordinates | 2002311..2002406 (+) | Length | 32 a.a. |
Antitoxin (RNA)
Gene name | sprA1AS | ||
Locus tag | - | ||
Coordinates | 2002434..2002491 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JMO08_RS09805 (JMO08_001961) | 1997474..1998124 | + | 651 | WP_001795210.1 | excalibur calcium-binding domain-containing protein | - |
JMO08_RS09810 (JMO08_001962) | 1998205..1999200 | + | 996 | WP_000070642.1 | DUF4352 domain-containing protein | - |
JMO08_RS09815 (JMO08_001963) | 1999275..1999901 | + | 627 | WP_000669024.1 | hypothetical protein | - |
JMO08_RS09820 (JMO08_001964) | 1999942..2000283 | + | 342 | WP_000627540.1 | DUF3969 family protein | - |
JMO08_RS09825 (JMO08_001965) | 2000384..2000956 | + | 573 | WP_000414216.1 | hypothetical protein | - |
JMO08_RS09830 (JMO08_001966) | 2001154..2002166 | - | 1013 | Protein_1946 | IS3 family transposase | - |
JMO08_RS09835 (JMO08_001967) | 2002311..2002406 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin |
- | 2002434..2002491 | - | 58 | - | - | Antitoxin |
JMO08_RS09840 (JMO08_001968) | 2002529..2002630 | + | 102 | WP_001792025.1 | hypothetical protein | - |
JMO08_RS09845 (JMO08_001969) | 2002608..2002769 | - | 162 | Protein_1949 | transposase | - |
JMO08_RS09850 (JMO08_001970) | 2002754..2003164 | - | 411 | WP_001808705.1 | IS21 family transposase | - |
JMO08_RS09855 (JMO08_001971) | 2003706..2004936 | - | 1231 | Protein_1951 | restriction endonuclease subunit S | - |
JMO08_RS09860 (JMO08_001972) | 2004929..2006485 | - | 1557 | WP_000028669.1 | type I restriction-modification system subunit M | - |
JMO08_RS09865 (JMO08_001973) | 2006649..2006783 | - | 135 | WP_001791797.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | lukD / hlgA / selk | 1978293..2077037 | 98744 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 32 a.a. Molecular weight: 3554.32 Da Isoelectric Point: 10.4449
>T212139 WP_001801861.1 NZ_CP080562:2002311-2002406 [Staphylococcus aureus]
VMLIFVHIIAPVISGCAIAFFSYWLSRRNTK
VMLIFVHIIAPVISGCAIAFFSYWLSRRNTK
Download Length: 96 bp
>T212139 NZ_CP106995:714669-714965 [Escherichia coli]
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA
Antitoxin
Download Length: 58 bp
>AT212139 NZ_CP080562:c2002491-2002434 [Staphylococcus aureus]
AACGAAAATAAGTATTTACTTATACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG
AACGAAAATAAGTATTTACTTATACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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