Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | SprG3-sprA1AS/- |
Location | 2191023..2191220 | Replicon | chromosome |
Accession | NZ_CP080251 | ||
Organism | Staphylococcus aureus strain NT_611 |
Toxin (Protein)
Gene name | SprG3 | Uniprot ID | Q2FWA7 |
Locus tag | KZZ50_RS10940 | Protein ID | WP_001802298.1 |
Coordinates | 2191116..2191220 (-) | Length | 35 a.a. |
Antitoxin (RNA)
Gene name | sprA1AS | ||
Locus tag | - | ||
Coordinates | 2191023..2191061 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
KZZ50_RS10915 | 2187210..2187875 | - | 666 | WP_001024089.1 | SDR family oxidoreductase | - |
KZZ50_RS10920 | 2188027..2188347 | + | 321 | WP_000003759.1 | Zn(II)-responsive metalloregulatory transcriptional repressor CzrA | - |
KZZ50_RS10925 | 2188349..2189326 | + | 978 | WP_000019733.1 | CDF family zinc efflux transporter CzrB | - |
KZZ50_RS10930 | 2189592..2190683 | + | 1092 | WP_000495669.1 | hypothetical protein | - |
KZZ50_RS10935 | 2191003..2191077 | + | 75 | Protein_2119 | hypothetical protein | - |
- | 2191023..2191061 | + | 39 | - | - | Antitoxin |
KZZ50_RS10940 | 2191116..2191220 | - | 105 | WP_001802298.1 | hypothetical protein | Toxin |
KZZ50_RS10945 | 2191900..2192058 | + | 159 | WP_001792784.1 | hypothetical protein | - |
KZZ50_RS10950 | 2192716..2193573 | - | 858 | WP_000370925.1 | Cof-type HAD-IIB family hydrolase | - |
KZZ50_RS10955 | 2193641..2194423 | - | 783 | WP_000908185.1 | ABC transporter ATP-binding protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 35 a.a. Molecular weight: 3906.77 Da Isoelectric Point: 5.5724
>T211447 WP_001802298.1 NZ_CP080251:c2191220-2191116 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
Download Length: 105 bp
>T211447 NZ_CP104866:c146983-146702 [Pseudomonas aeruginosa]
ATGAGCCTGAAGTGGACCCGCAAGGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGA
AAAAGCCCTGAAAGCCGTCCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGC
CCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCTTTTCGGGTAAAAGGCAAGGAA
ATCCAGATTTTGCGCATCGACAGGGTCGAAATTACCCCATAA
ATGAGCCTGAAGTGGACCCGCAAGGCGGCCGCCGACCTGGACGCCATCTACGACCATTACGTCGTGCTGATCGGCCCGGA
AAAAGCCCTGAAAGCCGTCCAGGACATCGTCGAGCAGGTGAAACCGCTGCAGCAGGTAGCCAACCAGGGGGCAGGGCGGC
CCAGCGAGGTGCCAGGCGTACGCACCCTGACCCTGGAGCGCTGGCCGTTCAGCGCCCCTTTTCGGGTAAAAGGCAAGGAA
ATCCAGATTTTGCGCATCGACAGGGTCGAAATTACCCCATAA
Antitoxin
Download Length: 39 bp
>AT211447 NZ_CP080251:2191023-2191061 [Staphylococcus aureus]
AACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGAC
AACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGAC
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|