Detailed information of TA system TA209939

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): yonT-SR6/-
• Location: 1914462..1914679
• Replicon: chromosome
• Accession: NZ_CP079759
• Organism: Bacillus sp. LJBS17

Toxin (Protein)

• Gene name: yonT
• Uniprot ID: -
• Locus tag: KXZ66_RS09585
• Protein ID: WP_017696861.1
• Coordinates: 1914462..1914638 (+)
• Length: 59 a.a.

Antitoxin (RNA)

Gene name	SR6
Locus tag	-
Coordinates	1914579..1914679 (-)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
KXZ66_RS09570	1910245..1911147	-	903	WP_003230984.1	GIY-YIG nuclease family protein	-
KXZ66_RS09575	1911332..1913206	-	1875	Protein_1841	hypothetical protein	-
KXZ66_RS09580	1913247..1913441	-	195	WP_068947523.1	hypothetical protein	-
-	1914424..1914521	-	98	NuclAT_0	-	-
-	1914424..1914521	-	98	NuclAT_0	-	-
-	1914424..1914521	-	98	NuclAT_0	-	-
-	1914424..1914521	-	98	NuclAT_0	-	-
KXZ66_RS09585	1914462..1914638	+	177	WP_017696861.1	hypothetical protein	Toxin
-	1914579..1914679	-	101	-	-	Antitoxin
KXZ66_RS09590	1914657..1914908	+	252	WP_159376885.1	hypothetical protein	-
KXZ66_RS09595	1914953..1915141	+	189	WP_003230987.1	hypothetical protein	-
KXZ66_RS09600	1915258..1916103	+	846	WP_219144908.1	GIY-YIG nuclease family protein	-
KXZ66_RS09605	1916122..1917339	+	1218	WP_213377198.1	hypothetical protein	-
KXZ66_RS09610	1917689..1917955	+	267	WP_219144909.1	hypothetical protein	-
KXZ66_RS09615	1917994..1918236	+	243	WP_210216315.1	hypothetical protein	-
KXZ66_RS09620	1918346..1918570	+	225	WP_219144910.1	hypothetical protein	-
KXZ66_RS09625	1918624..1919133	+	510	WP_219144911.1	hypothetical protein	-
KXZ66_RS09630	1919255..1919458	+	204	WP_219144973.1	helix-turn-helix transcriptional regulator	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	1848796..2042046	193250

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 59 a.a.
• Molecular weight: 6878.45 Da
• Isoelectric Point: 12.8833

>T209939 WP_017696861.1 NZ_CP079759:1914462-1914638 [Bacillus sp. LJBS17]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Nucleotide

• Length: 177 bp

>T209939 NZ_CP104347:c2471194-2471012 [Acinetobacter baumannii]
GTGAAAAGTCTGGATTTAATCAAAATGATTGAAGCAGATGGTTGGTATGAGGTTAGGGTTTCAGGAAGTCATCATCACTT
TAAACACCCAACCAAAAAAGGGTTAGTTACAATCTCACATCCTAAAAAGGATTTACCAAACGGAACTGTTAAAAGCATTT
TGAAACAAGCGGGTCTAAATTGA

Antitoxin

Nucleotide

• Length: 101 bp

>AT209939 NZ_CP079759:c1914679-1914579 [Bacillus sp. LJBS17]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Structures

Antitoxin