Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | higBA (relBE)/- |
| Location | 1436782..1437196 | Replicon | chromosome |
| Accession | NZ_CP077928 | ||
| Organism | Staphylococcus aureus strain 196 | ||
Toxin (Protein)
| Gene name | higB | Uniprot ID | - |
| Locus tag | KU511_RS07290 | Protein ID | WP_158171471.1 |
| Coordinates | 1436945..1437196 (-) | Length | 84 a.a. |
Antitoxin (Protein)
| Gene name | higA | Uniprot ID | - |
| Locus tag | KU511_RS07285 | Protein ID | WP_000028424.1 |
| Coordinates | 1436782..1436955 (-) | Length | 58 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU511_RS07245 (1432816) | 1432816..1434039 | - | 1224 | WP_001037578.1 | PBSX family phage terminase large subunit | - |
| KU511_RS07250 (1434032) | 1434032..1434493 | - | 462 | WP_001794914.1 | hypothetical protein | - |
| KU511_RS07255 (1434880) | 1434880..1435281 | - | 402 | WP_000286968.1 | hypothetical protein | - |
| KU511_RS07260 (1435282) | 1435282..1435455 | - | 174 | WP_000595256.1 | transcriptional activator RinB | - |
| KU511_RS07265 (1435452) | 1435452..1435838 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| KU511_RS07270 (1435835) | 1435835..1436041 | - | 207 | WP_168751664.1 | DUF1381 domain-containing protein | - |
| KU511_RS07275 (1436078) | 1436078..1436605 | - | 528 | WP_054192935.1 | dUTPase | - |
| KU511_RS07280 (1436620) | 1436620..1436781 | - | 162 | WP_000889684.1 | hypothetical protein | - |
| KU511_RS07285 (1436782) | 1436782..1436955 | - | 174 | WP_000028424.1 | hypothetical protein | Antitoxin |
| KU511_RS07290 (1436945) | 1436945..1437196 | - | 252 | WP_158171471.1 | DUF1024 family protein | Toxin |
| KU511_RS07295 (1437189) | 1437189..1437554 | - | 366 | WP_225798359.1 | acetyltransferase | - |
| KU511_RS07300 (1437544) | 1437544..1437744 | - | 201 | WP_123157447.1 | hypothetical protein | - |
| KU511_RS07305 (1437741) | 1437741..1438148 | - | 408 | WP_176323847.1 | hypothetical protein | - |
| KU511_RS07310 (1438151) | 1438151..1438357 | - | 207 | WP_054192815.1 | hypothetical protein | - |
| KU511_RS07315 (1438370) | 1438370..1438618 | - | 249 | WP_160194614.1 | phi PVL orf 51-like protein | - |
| KU511_RS07320 (1438619) | 1438619..1438990 | - | 372 | WP_053005624.1 | SA1788 family PVL leukocidin-associated protein | - |
| KU511_RS07325 (1438991) | 1438991..1439176 | - | 186 | WP_001187244.1 | DUF3113 family protein | - |
| KU511_RS07330 (1439181) | 1439181..1439585 | - | 405 | WP_021758092.1 | DUF1064 domain-containing protein | - |
| KU511_RS07335 (1439595) | 1439595..1439816 | - | 222 | WP_001123695.1 | DUF3269 family protein | - |
| KU511_RS07340 (1439829) | 1439829..1439987 | - | 159 | WP_031929742.1 | hypothetical protein | - |
| KU511_RS07345 (1439984) | 1439984..1440769 | - | 786 | WP_024273306.1 | ATP-binding protein | - |
| KU511_RS07350 (1440782) | 1440782..1441603 | - | 822 | WP_225798360.1 | phage replisome organizer N-terminal domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | vWbp / sell / sec | 1371764..1450294 | 78530 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 84 a.a. Molecular weight: 9463.35 Da Isoelectric Point: 3.6767
>T208671 WP_158171471.1 NZ_CP077928:c1437196-1436945 [Staphylococcus aureus]
MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEILEGLPNAMQDALKEDIDLDEAVGIMVSQVVYKYEEEQE
NEY
MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEILEGLPNAMQDALKEDIDLDEAVGIMVSQVVYKYEEEQE
NEY
Download Length: 252 bp
>T208671 NZ_CP103704:1808751-1809005 [Escherichia coli]
GTGAAACTAATCTGGTCTGAGGAATCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACGCCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
GTGAAACTAATCTGGTCTGAGGAATCATGGGATGATTATCTGTACTGGCAGGAAACAGATAAGCGAATTGTTAAAAAGAT
CAATGAACTTATCAAAGATACCCGCAGAACGCCATTTGAAGGTAAGGGGAAGCCAGAACCCCTGAAACATAATTTGTCAG
GTTTCTGGTCCCGACGCATTACAGAGGAGCACCGTCTGGTATACGCGGTTACCGACGATTCACTGCTCATTGCAGCATGT
CGTTATCATTATTGA
Antitoxin
Download Length: 58 a.a. Molecular weight: 6468.29 Da Isoelectric Point: 4.2484
>AT208671 WP_000028424.1 NZ_CP077928:c1436955-1436782 [Staphylococcus aureus]
MSISVGDKVYNHETNESLEIVQLVGDIRDTHYKLSDDSVISIIDFITKPIYLIKGDE
MSISVGDKVYNHETNESLEIVQLVGDIRDTHYKLSDDSVISIIDFITKPIYLIKGDE
Download Length: 174 bp
>AT208671 NZ_CP103704:1808503-1808754 [Escherichia coli]
ATGCGTACAATTAGTTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTCATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGTTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACGGAAAAGGAC
ATTATTGAGTGA
ATGCGTACAATTAGTTACAGCGAAGCGCGTCAGAATTTGTCGGCAACAATGATGAAAGCCGTTGAAGATCATGCCCCGAT
CCTCATTACTCGTCAGAATGGAGAGGCTTGTGTTCTGATGTCACTCGAAGAATACAACTCGCTGGAAGAGACGGCTTATC
TACTGCGTTCCCCCGCTAACGCCCGGAGATTGATGGACTCAATCGATAGCCTGAAATCAGGCAAAGGAACGGAAAAGGAC
ATTATTGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|
Antitoxin
| Source | ID | Structure |
|---|