Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) sprG-sprF/-
Location 2612849..2613127 Replicon chromosome
Accession NZ_CP077755
Organism Staphylococcus aureus strain WHC09

Toxin (Protein)


Gene name SprG3 Uniprot ID Q2FWA7
Locus tag KTR65_RS12830 Protein ID WP_001802298.1
Coordinates 2612849..2612953 (+) Length 35 a.a.

Antitoxin (RNA)


Gene name SprF3
Locus tag -
Coordinates 2612949..2613127 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KTR65_RS12810 2609646..2610428 + 783 WP_031590911.1 ABC transporter ATP-binding protein -
KTR65_RS12815 2610496..2611353 + 858 WP_000370930.1 HAD family hydrolase -
KTR65_RS12820 2612011..2612169 - 159 WP_001792784.1 hypothetical protein -
KTR65_RS12825 2612162..2612332 - 171 WP_001792292.1 transposase -
KTR65_RS12830 2612849..2612953 + 105 WP_001802298.1 hypothetical protein Toxin
- 2612949..2613127 - 179 - - Antitoxin
KTR65_RS12835 2613395..2614486 - 1092 WP_000495681.1 hypothetical protein -
KTR65_RS12840 2614752..2615732 - 981 WP_000019743.1 CDF family zinc efflux transporter CzrB -
KTR65_RS12845 2615734..2616054 - 321 WP_000003759.1 Zn(II)-responsive metalloregulatory transcriptional repressor CzrA -
KTR65_RS12850 2616206..2616871 + 666 WP_001024095.1 SDR family oxidoreductase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 35 a.a.        Molecular weight: 3906.77 Da        Isoelectric Point: 5.5724

>T207703 WP_001802298.1 NZ_CP077755:2612849-2612953 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK

Download         Length: 105 bp

>T207703 NZ_CP103479:c4469294-4468953 [Escherichia coli]
ATGAAAATTATACCTGCAACGACGCTGCGGGCGACGACGTCATACCTGTCGCCCGTCGTGGTCTGGCAAACATTACTGAC
CCGCCTACTGGAGCAGCACTACGGGCTGAATCTTAATGACACACCATTCAACAATGAAAAGGTGATTCAGGAACACATAG
ACGCCGGGATCACTCTGGTCGATGCCGTCAATTTTCTGGTGGAGAAGTACGAATTGATCCGTATCGACAGGAAAGGATTT
AGCTGGAAGGAACAGACGCCTTATCTTCGTGCGGTCGATATTTTACGGGCGCGACAGGCTACAGGTCTGCTGCGCCGCTG
CCATAACACCACGGCACGGTGA

Antitoxin


Download         Length: 179 bp

>AT207703 NZ_CP077755:c2613127-2612949 [Staphylococcus aureus]
GTGTTAAAATATATTTGTAGTAAGTAGAAGCAAAAGATGAAAATCTTTAACTCTTGAAACACAAAAAGGGCAACACTCGG
AAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAATGCCGGTCA
AAGCGAATAGAAGGTTATT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A2I7Y9L9


Antitoxin

Download structure file

References