Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 2601908..2602092 Replicon chromosome
Accession NZ_CP077741
Organism Staphylococcus aureus strain NL1

Toxin (Protein)


Gene name SprA2 Uniprot ID A0A2P7CQJ7
Locus tag KTE72_RS13070 Protein ID WP_000482647.1
Coordinates 2601985..2602092 (-) Length 36 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 2601908..2601968 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KTE72_RS13055 (KTE72_12955) 2597362..2597529 - 168 WP_001798790.1 hypothetical protein -
KTE72_RS13060 (KTE72_12960) 2597760..2599493 - 1734 WP_000486511.1 ABC transporter ATP-binding protein -
KTE72_RS13065 (KTE72_12965) 2599518..2601281 - 1764 WP_001064818.1 ABC transporter ATP-binding protein -
- 2601908..2601968 + 61 - - Antitoxin
KTE72_RS13070 (KTE72_12970) 2601985..2602092 - 108 WP_000482647.1 type I toxin-antitoxin system Fst family toxin Toxin
KTE72_RS13075 (KTE72_12975) 2602226..2602612 - 387 WP_000779355.1 flippase GtxA -
KTE72_RS13080 (KTE72_12980) 2602879..2604021 + 1143 WP_001176859.1 glycerate kinase -
KTE72_RS13085 (KTE72_12985) 2604081..2604740 + 660 WP_000831300.1 hypothetical protein -
KTE72_RS13090 (KTE72_12990) 2604928..2606139 + 1212 WP_001191974.1 multidrug effflux MFS transporter -
KTE72_RS13095 (KTE72_12995) 2606262..2606735 - 474 WP_000456489.1 GyrI-like domain-containing protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 36 a.a.        Molecular weight: 4012.76 Da        Isoelectric Point: 10.4935

>T207691 WP_000482647.1 NZ_CP077741:c2602092-2601985 [Staphylococcus aureus]
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK

Download         Length: 108 bp

>T207691 NZ_CP103479:1296481-1296792 [Escherichia coli]
ATGCACATCATTTCGAAAGCGCCATTTGAAGAGTGTGCGCGCAAATATCCTAACGACGCTCTGGCTCTACACTCATTGTA
TCGGGTTATTAAGGAAACGGATTTTTCTACACCAGAAGAAATGCGAACGGCGTTTCCTAACCTCGACAATTTTAAATATC
GCAACAAATGGTACGTTCTGGATGTCGGCGGGAACAATCTTAGGGTTATTGCCTACATAAACTTTGTTAATAAGCGGTTC
TTTGTGAAGCACATAACGAATCACGCAGAGTATGACAAACTGACACGTTACTACAGAGAGAACAAAGAATGA

Antitoxin


Download         Length: 61 bp

>AT207691 NZ_CP077741:2601908-2601968 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A2P7CQJ7


Antitoxin

Download structure file

References