Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | higBA (relBE)/COG4683-HTH_37 |
| Location | 64892..65552 | Replicon | chromosome |
| Accession | NZ_CP076651 | ||
| Organism | Serratia ureilytica strain S24 | ||
Toxin (Protein)
| Gene name | higB | Uniprot ID | - |
| Locus tag | KQJ82_RS00310 | Protein ID | WP_089194950.1 |
| Coordinates | 65199..65552 (-) | Length | 118 a.a. |
Antitoxin (Protein)
| Gene name | higA | Uniprot ID | A0A8G2G5Z5 |
| Locus tag | KQJ82_RS00305 | Protein ID | WP_016927038.1 |
| Coordinates | 64892..65194 (-) | Length | 101 a.a. |
Genomic Context
Location: 65991..67286 (1296 bp)
Type: Others
Protein ID: WP_196018657.1
Type: Others
Protein ID: WP_196018657.1
Location: 67313..68119 (807 bp)
Type: Others
Protein ID: WP_033643757.1
Type: Others
Protein ID: WP_033643757.1
Location: 60495..61409 (915 bp)
Type: Others
Protein ID: WP_033643752.1
Type: Others
Protein ID: WP_033643752.1
Location: 61534..62652 (1119 bp)
Type: Others
Protein ID: WP_016927040.1
Type: Others
Protein ID: WP_016927040.1
Location: 63258..64466 (1209 bp)
Type: Others
Protein ID: WP_123061821.1
Type: Others
Protein ID: WP_123061821.1
Location: 64892..65194 (303 bp)
Type: Antitoxin
Protein ID: WP_016927038.1
Type: Antitoxin
Protein ID: WP_016927038.1
Location: 65199..65552 (354 bp)
Type: Toxin
Protein ID: WP_089194950.1
Type: Toxin
Protein ID: WP_089194950.1
Location: 68094..68993 (900 bp)
Type: Others
Protein ID: WP_033643758.1
Type: Others
Protein ID: WP_033643758.1
Location: 69096..69461 (366 bp)
Type: Others
Protein ID: WP_033643759.1
Type: Others
Protein ID: WP_033643759.1
Loading, please wait
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KQJ82_RS00285 (KQJ82_00285) | 60495..61409 | - | 915 | WP_033643752.1 | branched-chain amino acid ABC transporter permease | - |
| KQJ82_RS00290 (KQJ82_00290) | 61534..62652 | - | 1119 | WP_016927040.1 | branched-chain amino acid ABC transporter substrate-binding protein | - |
| KQJ82_RS00300 (KQJ82_00300) | 63258..64466 | - | 1209 | WP_123061821.1 | aldose 1-epimerase family protein | - |
| KQJ82_RS00305 (KQJ82_00305) | 64892..65194 | - | 303 | WP_016927038.1 | XRE family transcriptional regulator | Antitoxin |
| KQJ82_RS00310 (KQJ82_00310) | 65199..65552 | - | 354 | WP_089194950.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| KQJ82_RS00315 (KQJ82_00315) | 65991..67286 | + | 1296 | WP_196018657.1 | MFS transporter | - |
| KQJ82_RS00320 (KQJ82_00320) | 67313..68119 | + | 807 | WP_033643757.1 | substrate-binding domain-containing protein | - |
| KQJ82_RS00325 (KQJ82_00325) | 68094..68993 | - | 900 | WP_033643758.1 | LysR family transcriptional regulator | - |
| KQJ82_RS00330 (KQJ82_00330) | 69096..69461 | - | 366 | WP_033643759.1 | diacylglycerol kinase | - |
Associated MGEs
Loading, please wait
MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 118 a.a. Molecular weight: 13532.47 Da Isoelectric Point: 9.0587
>T206115 WP_089194950.1 NZ_CP076651:c65552-65199 [Serratia ureilytica]
VWEIKTTDAFDHWFRSLSDADRAGVLAALMVLREKGPGLPRPYADTVKGSRYSNMKELRIQCRGEPLRAFFAFDPYRIGI
VLCAGNKAGNEKRFYDRMIQVADREFTNWLNTLNEKE
VWEIKTTDAFDHWFRSLSDADRAGVLAALMVLREKGPGLPRPYADTVKGSRYSNMKELRIQCRGEPLRAFFAFDPYRIGI
VLCAGNKAGNEKRFYDRMIQVADREFTNWLNTLNEKE
Download Length: 354 bp
>T206115 NZ_CP102141:c2115836-2115507 [Streptococcus suis]
ATGGAATTTGAGTCATATTCAGTGATACTTGCTCCAGCAGTGGAGAGGGAATTGGCAGCTATTTACGCCTATTTCTCGGA
ACAGTTCTCAGAAGAAATTGCCAAAAGACGAATTGGGATGATTGTCCAAGCTTTGGAGAGTTTGCAAATTTTTCCTGAAC
GTGGCTTTAACGCCGATAACCGTTTTGGTAAGCAGATAGACCCGCCACATCTAACCCGAGGTTACGTTATTGGAAAAGAC
TACATCGCCCTCTATCGCGTAGTGAAAAATGAAGTTCGAGTGGGTCACCTTTTTGCGACCAAGAGTGATTATGTGAAGTT
GTTGAAGTGA
ATGGAATTTGAGTCATATTCAGTGATACTTGCTCCAGCAGTGGAGAGGGAATTGGCAGCTATTTACGCCTATTTCTCGGA
ACAGTTCTCAGAAGAAATTGCCAAAAGACGAATTGGGATGATTGTCCAAGCTTTGGAGAGTTTGCAAATTTTTCCTGAAC
GTGGCTTTAACGCCGATAACCGTTTTGGTAAGCAGATAGACCCGCCACATCTAACCCGAGGTTACGTTATTGGAAAAGAC
TACATCGCCCTCTATCGCGTAGTGAAAAATGAAGTTCGAGTGGGTCACCTTTTTGCGACCAAGAGTGATTATGTGAAGTT
GTTGAAGTGA
Antitoxin
Download Length: 101 a.a. Molecular weight: 11093.96 Da Isoelectric Point: 6.4738
>AT206115 WP_016927038.1 NZ_CP076651:c65194-64892 [Serratia ureilytica]
MGRTLEQLIADEKPEVVAKAQALAADIMLNIHLAELREKVQKTQVEMAQALGIRQPTVAVMEKPGRDLKLSSLKRYVEAA
GGKLRLDIELPDGSHYEFVL
MGRTLEQLIADEKPEVVAKAQALAADIMLNIHLAELREKVQKTQVEMAQALGIRQPTVAVMEKPGRDLKLSSLKRYVEAA
GGKLRLDIELPDGSHYEFVL
Download Length: 303 bp
>AT206115 NZ_CP102141:c2116113-2115826 [Streptococcus suis]
TTGATAACTATAAAGAAGGATGCCCAAGTAAATTTTAAAACTGATTCCAGACTTTTAGAAAAAGCCAAGGAAGTATTTGC
TATGAACCAGCTGGATTTGACTGCTGGTTTTAACCTCTTCTTGCAAAATATCGCTGTAAAAAATGAGTTGCCAATTCTGA
CTGAAGAAGAGTTGGAAAGAGAAGAGTTGTTTTTACAGCTTCAGAAGGAAATCCAGGAAAACCAACAGGCGATTGAGGCA
GGTCAAGGGATCAGCCTAGAAAGTGTCAAAGAGAAGTATGGAATTTGA
TTGATAACTATAAAGAAGGATGCCCAAGTAAATTTTAAAACTGATTCCAGACTTTTAGAAAAAGCCAAGGAAGTATTTGC
TATGAACCAGCTGGATTTGACTGCTGGTTTTAACCTCTTCTTGCAAAATATCGCTGTAAAAAATGAGTTGCCAATTCTGA
CTGAAGAAGAGTTGGAAAGAGAAGAGTTGTTTTTACAGCTTCAGAAGGAAATCCAGGAAAACCAACAGGCGATTGAGGCA
GGTCAAGGGATCAGCCTAGAAAGTGTCAAAGAGAAGTATGGAATTTGA