Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) fst-RNAII/Fst(toxin)
Location 415..629 Replicon plasmid pUAMSEL1
Accession NZ_CP076494
Organism Enterococcus faecalis strain UAMS_EL54

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag KPU55_RS14935 Protein ID WP_002360667.1
Coordinates 519..629 (-) Length 37 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 415..479 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
- 415..479 + 65 - - Antitoxin
KPU55_RS14935 519..629 - 111 WP_002360667.1 type I toxin-antitoxin system Fst family toxin Toxin
KPU55_RS14940 711..923 - 213 Protein_2 excinuclease ABC subunit C -
KPU55_RS14945 880..1230 - 351 WP_002360672.1 hypothetical protein -
KPU55_RS14950 1227..2555 - 1329 WP_129268066.1 ultraviolet resistance protein UvrA -
KPU55_RS14955 2984..3286 - 303 WP_002372577.1 DUF6440 family protein -
KPU55_RS14960 3298..3507 - 210 WP_002382045.1 hypothetical protein -
KPU55_RS14965 3568..3792 - 225 WP_002383635.1 ultraviolet resistance protein UvrA repressor UvrC -
KPU55_RS14970 3786..4100 - 315 WP_002383634.1 hypothetical protein -
KPU55_RS14975 4090..4197 - 108 Protein_9 recombinase family protein -
KPU55_RS14980 4271..5432 + 1162 Protein_10 IS3 family transposase -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid aph(3')-III / ant(6)-Ia / erm(B) cylI / cylA / cylB / cylM / cylS / cylL / cylR1 / cylR2 1..119714 119714
- flank IS/Tn - - 4596..5432 836


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 37 a.a.        Molecular weight: 4117.92 Da        Isoelectric Point: 4.1672

>T205831 WP_002360667.1 NZ_CP076494:c629-519 [Enterococcus faecalis]
VLFVKDLMSLVIAPIFVGLVLEMISRVLDEEDDNRK

Download         Length: 111 bp

>T205831 NZ_CP101915:1978467-1978570 [Escherichia coli]
GGCAAGGCAACTAAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTGTTCGGTCTCTTTTT

Antitoxin


Download         Length: 65 bp

>AT205831 NZ_CP076494:415-479 [Enterococcus faecalis]
AACGACATTAAATCGTACAAATAACACAAAAAGCAATCCTACGGCGAATAGGATTGCTTTTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References