Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) fst-RNAII/-
Location 2492619..2492813 Replicon chromosome
Accession NZ_CP076493
Organism Enterococcus faecalis strain UAMS_EL54

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag KPU55_RS12105 Protein ID WP_015543884.1
Coordinates 2492619..2492714 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 2492749..2492813 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KPU55_RS12085 2487798..2488913 + 1116 WP_002379062.1 FAD-dependent oxidoreductase -
KPU55_RS12090 2488980..2490134 - 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
KPU55_RS12095 2490149..2490586 - 438 WP_002355279.1 PTS sugar transporter subunit IIA -
KPU55_RS12100 2490601..2492373 - 1773 WP_010706745.1 PTS mannitol-specific transporter subunit IIBC -
KPU55_RS12105 2492619..2492714 + 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
- 2492749..2492813 - 65 - - Antitoxin
KPU55_RS12110 2492969..2493403 - 435 WP_002358391.1 PTS sugar transporter subunit IIA -
KPU55_RS12115 2493414..2495447 - 2034 WP_002387671.1 PRD domain-containing protein -
KPU55_RS12120 2495438..2497180 - 1743 WP_002399652.1 PTS transporter subunit EIIC -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T205814 WP_015543884.1 NZ_CP076493:2492619-2492714 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T205814 NZ_CP101912:2691833-2692408 [Pseudomonas aeruginosa]
ATGAGGCATTCCCCATTCACCGCCGTCTACGACGCGTGCGTTCTATATCCCGCGCCACTGCGGGATTTCCTGATGTGGCT
CGGCCTGTCTGGCCGCTTCCGGGCGCGGTGGAGCCAAGCCATTCATGAGGAGTGGAAACGCAACCTGTTGATCAACCGCC
CCGATCTCACCCGGGTTCAGGTCGACAGGACGTCGGATCTCATGGACAGGGCCATTCCGGACGGCTTGGTGGAGGGCTAC
GAAGCGCTCGTGGCAGGCCTGACATTACCCGATCCGAATGATCGGCACGTCCTGGCTGCGGCGATTCGCTGCGGTGCGAG
CGTGATTGTGACGTTCAACGAACGTGATTTCCCGAACGATCTGCTGGCTCCGTACGGCATCGAATCGCAGCACCCCGATG
AGTTTGTGGACAACCTGCTGGATCTGGATGCGGCCGCCGTAGTGTCGGCTGCGCAGCGCCAGCGTGCCCAACTCAAGCAT
CCGCCGATCGATGTGGACCGCTATCTCGAAATCCTGCTGCGCCAAGGCCTTGTGCAAACGACCAAGGTGCTGGCGACCTA
TCGCACCATTCTCTGA

Antitoxin


Download         Length: 65 bp

>AT205814 NZ_CP076493:c2492813-2492749 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References