Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | fst-RNAII/Fst(toxin) |
Location | 75855..76069 | Replicon | plasmid pUAMSEL1 |
Accession | NZ_CP076489 | ||
Organism | Enterococcus faecalis strain UAMS_EL56 |
Toxin (Protein)
Gene name | fst | Uniprot ID | - |
Locus tag | KPU60_RS15375 | Protein ID | WP_002360667.1 |
Coordinates | 75959..76069 (-) | Length | 37 a.a. |
Antitoxin (RNA)
Gene name | RNAII | ||
Locus tag | - | ||
Coordinates | 75855..75919 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
KPU60_RS15345 | 71494..71682 | - | 189 | Protein_86 | hypothetical protein | - |
KPU60_RS15350 | 71607..72590 | - | 984 | WP_000007382.1 | prolipoprotein diacylglyceryl transferase | - |
KPU60_RS15355 | 72634..73644 | - | 1011 | WP_001058676.1 | replication initiator protein A | - |
KPU60_RS15360 | 74116..74961 | + | 846 | WP_000239313.1 | AAA family ATPase | - |
KPU60_RS15365 | 74954..75325 | + | 372 | WP_000049959.1 | replication-associated protein RepC | - |
KPU60_RS15370 | 75429..75719 | - | 291 | WP_001137528.1 | hypothetical protein | - |
- | 75855..75919 | + | 65 | - | - | Antitoxin |
KPU60_RS15375 | 75959..76069 | - | 111 | WP_002360667.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
KPU60_RS15380 | 76151..76363 | - | 213 | Protein_93 | excinuclease ABC subunit C | - |
KPU60_RS15385 | 76320..76670 | - | 351 | WP_002360672.1 | hypothetical protein | - |
KPU60_RS15390 | 76667..77995 | - | 1329 | WP_129268066.1 | ultraviolet resistance protein UvrA | - |
KPU60_RS15395 | 78424..78726 | - | 303 | WP_002372577.1 | DUF6440 family protein | - |
KPU60_RS15400 | 78738..78947 | - | 210 | WP_002382045.1 | hypothetical protein | - |
KPU60_RS15405 | 79008..79232 | - | 225 | WP_002383635.1 | ultraviolet resistance protein UvrA repressor UvrC | - |
KPU60_RS15410 | 79226..79540 | - | 315 | WP_002383634.1 | hypothetical protein | - |
KPU60_RS15415 | 79530..79637 | - | 108 | Protein_100 | recombinase family protein | - |
KPU60_RS15420 | 79711..80872 | + | 1162 | Protein_101 | IS3 family transposase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | aph(3')-III / ant(6)-Ia / erm(B) | cylI / cylA / cylB / cylM / cylS / cylL / cylR1 / cylR2 | 1..119713 | 119713 | |
- | flank | IS/Tn | - | - | 80036..80872 | 836 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 37 a.a. Molecular weight: 4117.92 Da Isoelectric Point: 4.1672
>T205794 WP_002360667.1 NZ_CP076489:c76069-75959 [Enterococcus faecalis]
VLFVKDLMSLVIAPIFVGLVLEMISRVLDEEDDNRK
VLFVKDLMSLVIAPIFVGLVLEMISRVLDEEDDNRK
Download Length: 111 bp
>T205794 NZ_CP101908:c14266-13916 [Salmonella enterica subsp. enterica]
ATGTGGGTCATCGAGACAACCGACACCTTTGATGAGTGGTTCGATGCTCTGGATGATACCGATAGAGCAAACGTGCTGGC
TTCGATGATGGTGCTGCGAGATAGAGGCCCCATGCTGTCGAGGCCATACGCGGATACTGTTAACGGTTCATCCTACAGCA
ACATGAAAGAGCTTCGGGTCCAAAGCAAAGGAGATCCTATCAGAGCGTTCTTTGCGTTCGATCCAAAGCGTAAGGGGATT
CTTCTCTGCGCCGGTAACAAGACCGGGGACGAGAAAAGGTTTTATGAAGTAATGATCCCAATTGCAGACCGTGAGTTTGC
GGCGCACTTGGATAAATTGAAGAAGGAGTGA
ATGTGGGTCATCGAGACAACCGACACCTTTGATGAGTGGTTCGATGCTCTGGATGATACCGATAGAGCAAACGTGCTGGC
TTCGATGATGGTGCTGCGAGATAGAGGCCCCATGCTGTCGAGGCCATACGCGGATACTGTTAACGGTTCATCCTACAGCA
ACATGAAAGAGCTTCGGGTCCAAAGCAAAGGAGATCCTATCAGAGCGTTCTTTGCGTTCGATCCAAAGCGTAAGGGGATT
CTTCTCTGCGCCGGTAACAAGACCGGGGACGAGAAAAGGTTTTATGAAGTAATGATCCCAATTGCAGACCGTGAGTTTGC
GGCGCACTTGGATAAATTGAAGAAGGAGTGA
Antitoxin
Download Length: 65 bp
>AT205794 NZ_CP076489:75855-75919 [Enterococcus faecalis]
AACGACATTAAATCGTACAAATAACACAAAAAGCAATCCTACGGCGAATAGGATTGCTTTTTTTT
AACGACATTAAATCGTACAAATAACACAAAAAGCAATCCTACGGCGAATAGGATTGCTTTTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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