Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) fst-RNAII/-
Location 2942585..2942779 Replicon chromosome
Accession NZ_CP076488
Organism Enterococcus faecalis strain UAMS_EL56

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag KPU60_RS14430 Protein ID WP_015543884.1
Coordinates 2942585..2942680 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 2942715..2942779 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KPU60_RS14410 2937764..2938879 + 1116 WP_002379062.1 FAD-dependent oxidoreductase -
KPU60_RS14415 2938946..2940100 - 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
KPU60_RS14420 2940115..2940552 - 438 WP_002355279.1 PTS sugar transporter subunit IIA -
KPU60_RS14425 2940567..2942339 - 1773 WP_010706745.1 PTS mannitol-specific transporter subunit IIBC -
KPU60_RS14430 2942585..2942680 + 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
- 2942715..2942779 - 65 - - Antitoxin
KPU60_RS14435 2942935..2943369 - 435 WP_002358391.1 PTS sugar transporter subunit IIA -
KPU60_RS14440 2943380..2945413 - 2034 WP_002387671.1 PRD domain-containing protein -
KPU60_RS14445 2945404..2947146 - 1743 WP_002399652.1 PTS transporter subunit EIIC -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T205787 WP_015543884.1 NZ_CP076488:2942585-2942680 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T205787 NZ_CP101907:c2894751-2894440 [Salmonella enterica subsp. enterica]
ATGCAATTTATAGAAACGGAACTCTTTACTGAAGATGTTAAAAAACTGCTCGATGATGATGAATACCATAAGCTTCAGGT
TTTTATGGCTCAGCATCCAGATTGTGGTGATGTCATTCAGGAAACGGGCGGCCTGAGAAAAATGCGCTGGGGAGCGCGAG
GCAAAGGAAAGCGTAGTGGCGTGCGAATTATCTATTTTCACCGTAGTCAACGGTATGAGATTCGCTTGCTTCTGATTTAT
CAAAAAGGCATTAAAGATGATCTCACGCCGCAGGAAAAAGCGGTGCTTCGTATGCTGAATGAGAGGTGGTAG

Antitoxin


Download         Length: 65 bp

>AT205787 NZ_CP076488:c2942779-2942715 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References