Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | txpA-ratA/- |
| Location | 408142..408540 | Replicon | chromosome |
| Accession | NZ_CP076488 | ||
| Organism | Enterococcus faecalis strain UAMS_EL56 | ||
Toxin (Protein)
| Gene name | txpA | Uniprot ID | - |
| Locus tag | KPU60_RS02125 | Protein ID | WP_277813408.1 |
| Coordinates | 408142..408285 (-) | Length | 48 a.a. |
Antitoxin (RNA)
| Gene name | ratA | ||
| Locus tag | - | ||
| Coordinates | 408386..408540 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KPU60_RS02115 | 403455..403598 | - | 144 | WP_002387585.1 | putative holin-like toxin | - |
| KPU60_RS02120 | 404194..407952 | + | 3759 | WP_010706868.1 | WxL domain-containing protein | - |
| KPU60_RS02125 | 408142..408285 | - | 144 | WP_277813408.1 | type I toxin-antitoxin system toxin PepG1 | Toxin |
| - | 408386..408540 | + | 155 | - | - | Antitoxin |
| KPU60_RS16485 | 408518..408592 | - | 75 | Protein_404 | type I toxin-antitoxin system toxin | - |
| KPU60_RS02130 | 408848..410464 | - | 1617 | WP_002379014.1 | phosphatase PAP2/LCP family protein | - |
| KPU60_RS02135 | 410926..412221 | + | 1296 | WP_002379013.1 | ATP-binding protein | - |
| KPU60_RS02140 | 412230..412862 | + | 633 | WP_002358972.1 | RloB family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 48 a.a. Molecular weight: 5395.58 Da Isoelectric Point: 10.8331
>T205771 WP_277813408.1 NZ_CP076488:c408285-408142 [Enterococcus faecalis]
MHVFPKFTERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK
MHVFPKFTERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK
Download Length: 144 bp
>T205771 NZ_CP101880:2040-2318 [Klebsiella pneumoniae]
ATGGAGATATTCTGGACCATGCTGGCCAGCCAGGACAGGAAGCGCATTCGTGAGTACATTGCGGAGCAGAACCTGATAGC
CGCCATTGAACTGGACGAACGGATTGGTTATTCAGCCAGCAGCCTGGTCGGGCAGCCGTATAAAGGCCGCAACGGTCGTG
TGGAAGGTACCCGGGAACTGGTTATTCACCCGCATTTTGTTCTGGTTTATGAGGTCGACAGCCAGTGGGGAAAAGTGTAT
ATCCTGCGAGTATTGCATACTGCACAGAAGTGGCCATAG
ATGGAGATATTCTGGACCATGCTGGCCAGCCAGGACAGGAAGCGCATTCGTGAGTACATTGCGGAGCAGAACCTGATAGC
CGCCATTGAACTGGACGAACGGATTGGTTATTCAGCCAGCAGCCTGGTCGGGCAGCCGTATAAAGGCCGCAACGGTCGTG
TGGAAGGTACCCGGGAACTGGTTATTCACCCGCATTTTGTTCTGGTTTATGAGGTCGACAGCCAGTGGGGAAAAGTGTAT
ATCCTGCGAGTATTGCATACTGCACAGAAGTGGCCATAG
Antitoxin
Download Length: 155 bp
>AT205771 NZ_CP076488:408386-408540 [Enterococcus faecalis]
TTTTTAGGTAAGTGTGCTATAATAGCAATGAAAAGAGAGGTATGCGCCAACATACCTCTCTAGTGTAGAGCGGTTTAAGA
CGGTGACCTTTTGGATTATTTAAAAATAACCGTACTTGGTCAAAGTAGACGGTTATTTTTTCTTGTCTTCTTTAA
TTTTTAGGTAAGTGTGCTATAATAGCAATGAAAAGAGAGGTATGCGCCAACATACCTCTCTAGTGTAGAGCGGTTTAAGA
CGGTGACCTTTTGGATTATTTAAAAATAACCGTACTTGGTCAAAGTAGACGGTTATTTTTTCTTGTCTTCTTTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|