Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 403455..403851 Replicon chromosome
Accession NZ_CP076488
Organism Enterococcus faecalis strain UAMS_EL56

Toxin (Protein)


Gene name txpA Uniprot ID Q82Z30
Locus tag KPU60_RS02115 Protein ID WP_002387585.1
Coordinates 403455..403598 (-) Length 48 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 403709..403851 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KPU60_RS02110 400206..403265 + 3060 WP_002387586.1 WxL domain-containing protein -
KPU60_RS02115 403455..403598 - 144 WP_002387585.1 putative holin-like toxin Toxin
- 403709..403851 + 143 - - Antitoxin
KPU60_RS02120 404194..407952 + 3759 WP_010706868.1 WxL domain-containing protein -
KPU60_RS02125 408142..408285 - 144 WP_277813408.1 type I toxin-antitoxin system toxin PepG1 -
KPU60_RS16485 408518..408592 - 75 Protein_404 type I toxin-antitoxin system toxin -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-47)


Sequences


Toxin        


Download         Length: 48 a.a.        Molecular weight: 5244.37 Da        Isoelectric Point: 10.5719

>T205764 WP_002387585.1 NZ_CP076488:c403598-403455 [Enterococcus faecalis]
MNVSTKIYERRGLLSIAEALALMISFGSFIATLIFGILKVVKEDKKK

Download         Length: 144 bp

>T205764 NZ_CP101877:c4715181-4714897 [Klebsiella pneumoniae]
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGGCCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA

Antitoxin


Download         Length: 143 bp

>AT205764 NZ_CP076488:403709-403851 [Enterococcus faecalis]
TTGTGCTATAATAGCAATGAAAAGAGAGATATGCTTCAACATACCTCTCTGATGTAGAGCCGTTTAAGACGGTGACCTTT
TTAGTTACAAAAAATAACCGTACTCAGTCAAAGTTGACGGTTATTTTTTATTGTCATTTTTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A059MXV6


Antitoxin

Download structure file

References