Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | txpA-ratA/- |
| Location | 403455..403851 | Replicon | chromosome |
| Accession | NZ_CP076488 | ||
| Organism | Enterococcus faecalis strain UAMS_EL56 | ||
Toxin (Protein)
| Gene name | txpA | Uniprot ID | Q82Z30 |
| Locus tag | KPU60_RS02115 | Protein ID | WP_002387585.1 |
| Coordinates | 403455..403598 (-) | Length | 48 a.a. |
Antitoxin (RNA)
| Gene name | ratA | ||
| Locus tag | - | ||
| Coordinates | 403709..403851 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KPU60_RS02110 | 400206..403265 | + | 3060 | WP_002387586.1 | WxL domain-containing protein | - |
| KPU60_RS02115 | 403455..403598 | - | 144 | WP_002387585.1 | putative holin-like toxin | Toxin |
| - | 403709..403851 | + | 143 | - | - | Antitoxin |
| KPU60_RS02120 | 404194..407952 | + | 3759 | WP_010706868.1 | WxL domain-containing protein | - |
| KPU60_RS02125 | 408142..408285 | - | 144 | WP_277813408.1 | type I toxin-antitoxin system toxin PepG1 | - |
| KPU60_RS16485 | 408518..408592 | - | 75 | Protein_404 | type I toxin-antitoxin system toxin | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 48 a.a. Molecular weight: 5244.37 Da Isoelectric Point: 10.5719
>T205764 WP_002387585.1 NZ_CP076488:c403598-403455 [Enterococcus faecalis]
MNVSTKIYERRGLLSIAEALALMISFGSFIATLIFGILKVVKEDKKK
MNVSTKIYERRGLLSIAEALALMISFGSFIATLIFGILKVVKEDKKK
Download Length: 144 bp
>T205764 NZ_CP101877:c4715181-4714897 [Klebsiella pneumoniae]
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGGCCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGGCCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA
Antitoxin
Download Length: 143 bp
>AT205764 NZ_CP076488:403709-403851 [Enterococcus faecalis]
TTGTGCTATAATAGCAATGAAAAGAGAGATATGCTTCAACATACCTCTCTGATGTAGAGCCGTTTAAGACGGTGACCTTT
TTAGTTACAAAAAATAACCGTACTCAGTCAAAGTTGACGGTTATTTTTTATTGTCATTTTTAA
TTGTGCTATAATAGCAATGAAAAGAGAGATATGCTTCAACATACCTCTCTGATGTAGAGCCGTTTAAGACGGTGACCTTT
TTAGTTACAAAAAATAACCGTACTCAGTCAAAGTTGACGGTTATTTTTTATTGTCATTTTTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|