Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 3147920..3148205 Replicon chromosome
Accession NZ_CP075604
Organism Enterococcus faecalis strain 1207/14

Toxin (Protein)


Gene name txpA Uniprot ID -
Locus tag KKP64_RS15695 Protein ID WP_077143780.1
Coordinates 3148065..3148205 (+) Length 47 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 3147920..3148063 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KKP64_RS15670 3143072..3143704 - 633 WP_002358972.1 RloB family protein -
KKP64_RS15675 3143713..3145008 - 1296 WP_002396787.1 ATP-binding protein -
KKP64_RS15680 3145470..3147086 + 1617 WP_002358967.1 phosphatase PAP2/LCP family protein -
KKP64_RS15685 3147441..3147563 + 123 WP_002404776.1 putative holin-like toxin -
KKP64_RS15690 3147749..3147946 + 198 WP_002358966.1 type I toxin-antitoxin system toxin PepG1 -
- 3147920..3148063 - 144 - - Antitoxin
KKP64_RS15695 3148065..3148205 + 141 WP_077143780.1 putative holin-like toxin Toxin
KKP64_RS15700 3148436..3148579 + 144 WP_002396786.1 putative holin-like toxin -
KKP64_RS15705 3148774..3153049 - 4276 Protein_3093 WxL domain-containing protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(14-46)


Sequences


Toxin        


Download         Length: 47 a.a.        Molecular weight: 5188.30 Da        Isoelectric Point: 10.3265

>T203965 WP_077143780.1 NZ_CP075604:3148065-3148205 [Enterococcus faecalis]
ISLKNTNKNIVYCTAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 141 bp

>T203965 NZ_CP100494:c3596335-3595853 [Atlantibacter subterranea]
ATGAATGGAATGCGGGCAGTGGGCCCATGGAAAGTGTATCAACACCCCTGTTTTGTTGCCCAGGTTAAGGCGCTTCGGGA
CGAGGTAACCGCGCTCAAACATCACTATCCTGACGACTACCGAAACAAAGCGGCAACCAGGCTGTTAGCGGCTATCAACA
ACGCCCGCAAAGATATCTCTGCTGACCCAACCCAGGCAAAATTTCGCCTGGGTGACACGTTGGGCGCGGGTTACAGGCAC
TGGTTTCGGGCAAAGTTTCTCGGCCAGTATCGCTTATTTTTTCGCTATAGCCTGAGAGAACGCATCATTATTCTCGCATG
GGTCAATGATTCGCAAACGAAGCGCGCATATGGCAATAAGCGAGATGCGTATAAGGTTTTCGGTGAAATGCTGGCTTCAG
GGTATCCACCGGATGACTGGGAAGCTTTACTCAAAGAGACGATGAAGCAAGTCAGCCTGAGTCTGTGCGAACCTCAACCC
TGA

Antitoxin


Download         Length: 144 bp

>AT203965 NZ_CP075604:c3148063-3147920 [Enterococcus faecalis]
TGCTACAATAGAGACGAAAAGAGAGGTATGCTCTAACATACCTCTCTAGTGTAGAGCCGTTTAAGACGGTGACCTTTTTA
GTTACAAAAAATAACCGTACTCAGTCAAAGTAGACGGTTATTTTTTCTTGTCATTTTTAAGCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References