Detailed information of TA system
Overview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
Location | 1209493..1210015 | Replicon | chromosome |
Accession | NZ_CP072837 | ||
Organism | Macrococcus canis strain 19/EPI0118 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | - |
Locus tag | J9174_RS06215 | Protein ID | WP_164953490.1 |
Coordinates | 1209493..1209765 (-) | Length | 91 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | - |
Locus tag | J9174_RS06220 | Protein ID | WP_210151726.1 |
Coordinates | 1209758..1210015 (-) | Length | 86 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
J9174_RS06180 (J9174_06180) | 1205359..1205610 | + | 252 | WP_210151719.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
J9174_RS06185 (J9174_06185) | 1205610..1205870 | + | 261 | WP_210151720.1 | Txe/YoeB family addiction module toxin | - |
J9174_RS06190 (J9174_06190) | 1205871..1206320 | - | 450 | WP_210151721.1 | GNAT family N-acetyltransferase | - |
J9174_RS06195 (J9174_06195) | 1206403..1207143 | + | 741 | WP_210151722.1 | hypothetical protein | - |
J9174_RS06200 (J9174_06200) | 1207153..1208043 | + | 891 | WP_210151723.1 | phosphotransferase | - |
J9174_RS06205 (J9174_06205) | 1208217..1208702 | + | 486 | WP_210151724.1 | NUDIX domain-containing protein | - |
J9174_RS06210 (J9174_06210) | 1208708..1209475 | + | 768 | WP_210151725.1 | hypothetical protein | - |
J9174_RS06215 (J9174_06215) | 1209493..1209765 | - | 273 | WP_164953490.1 | Txe/YoeB family addiction module toxin | Toxin |
J9174_RS06220 (J9174_06220) | 1209758..1210015 | - | 258 | WP_210151726.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
J9174_RS06225 (J9174_06225) | 1210287..1210823 | + | 537 | WP_210151727.1 | GrpB family protein | - |
J9174_RS06230 (J9174_06230) | 1210828..1211277 | + | 450 | WP_233455643.1 | GNAT family N-acetyltransferase | - |
J9174_RS06235 (J9174_06235) | 1211279..1211479 | + | 201 | WP_210151728.1 | HAD family hydrolase | - |
J9174_RS06240 (J9174_06240) | 1211642..1212109 | + | 468 | WP_210151729.1 | hypothetical protein | - |
J9174_RS06245 (J9174_06245) | 1212207..1212575 | + | 369 | WP_210151730.1 | GntR family transcriptional regulator | - |
J9174_RS06250 (J9174_06250) | 1212575..1213675 | + | 1101 | WP_210151731.1 | DUF1648 domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 91 a.a. Molecular weight: 10698.44 Da Isoelectric Point: 9.7524
>T198967 WP_164953490.1 NZ_CP072837:c1209765-1209493 [Macrococcus canis]
MTKKKILFYSSGFEDYTYWQTNDKTVLKKINKLIKSIMIDGANEGIGKPEKLLGNYTGCYSRRITHEHRLVYKIEDDSIC
ILQCRFHYKR
MTKKKILFYSSGFEDYTYWQTNDKTVLKKINKLIKSIMIDGANEGIGKPEKLLGNYTGCYSRRITHEHRLVYKIEDDSIC
ILQCRFHYKR
Download Length: 273 bp
>T198967 NZ_CP097076:c4675078-4674794 [Klebsiella pneumoniae]
ATGACCTATGAACTGGAGTTTGATCCACGAGCCAGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGACCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA
ATGACCTATGAACTGGAGTTTGATCCACGAGCCAGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGACCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA
Antitoxin
Download Length: 86 a.a. Molecular weight: 9737.75 Da Isoelectric Point: 4.0808
>AT198967 WP_210151726.1 NZ_CP072837:c1210015-1209758 [Macrococcus canis]
MKVTTYSNARSNFRKIIDIVNEDSEPYTITTNTHNAVILSEQDYNSMIETLYLQSTPANAERLQKAIDESIDKNNLLQVE
IDLDD
MKVTTYSNARSNFRKIIDIVNEDSEPYTITTNTHNAVILSEQDYNSMIETLYLQSTPANAERLQKAIDESIDKNNLLQVE
IDLDD
Download Length: 258 bp
>AT198967 NZ_CP097076:c4675310-4675068 [Klebsiella pneumoniae]
ATGGCCACGCTCAATGTTCGACTGGACGATAAACTCAAAAAAGAGGCTTATGCCGTGCTGGAGAAACTCGATATGACACC
AACGGAGGCGGTACGCCTGCTGTTTCAATACATTGCGGAAAATGGCCGCATGCCGGTGAAAAGTATGACCATCAGTGATG
GCGAAGCGGCGTTATTACGCACCGTTCGCGAACGGCTGGAAAACCCACGGCCAGGGGTTAAGGTGAGTCTGGATGACCTA
TGA
ATGGCCACGCTCAATGTTCGACTGGACGATAAACTCAAAAAAGAGGCTTATGCCGTGCTGGAGAAACTCGATATGACACC
AACGGAGGCGGTACGCCTGCTGTTTCAATACATTGCGGAAAATGGCCGCATGCCGGTGAAAAGTATGACCATCAGTGATG
GCGAAGCGGCGTTATTACGCACCGTTCGCGAACGGCTGGAAAACCCACGGCCAGGGGTTAAGGTGAGTCTGGATGACCTA
TGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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