Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/Txe-RelB
Location 1209493..1210015 Replicon chromosome
Accession NZ_CP072837
Organism Macrococcus canis strain 19/EPI0118

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag J9174_RS06215 Protein ID WP_164953490.1
Coordinates 1209493..1209765 (-) Length 91 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag J9174_RS06220 Protein ID WP_210151726.1
Coordinates 1209758..1210015 (-) Length 86 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
J9174_RS06180 (J9174_06180) 1205359..1205610 + 252 WP_210151719.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
J9174_RS06185 (J9174_06185) 1205610..1205870 + 261 WP_210151720.1 Txe/YoeB family addiction module toxin -
J9174_RS06190 (J9174_06190) 1205871..1206320 - 450 WP_210151721.1 GNAT family N-acetyltransferase -
J9174_RS06195 (J9174_06195) 1206403..1207143 + 741 WP_210151722.1 hypothetical protein -
J9174_RS06200 (J9174_06200) 1207153..1208043 + 891 WP_210151723.1 phosphotransferase -
J9174_RS06205 (J9174_06205) 1208217..1208702 + 486 WP_210151724.1 NUDIX domain-containing protein -
J9174_RS06210 (J9174_06210) 1208708..1209475 + 768 WP_210151725.1 hypothetical protein -
J9174_RS06215 (J9174_06215) 1209493..1209765 - 273 WP_164953490.1 Txe/YoeB family addiction module toxin Toxin
J9174_RS06220 (J9174_06220) 1209758..1210015 - 258 WP_210151726.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
J9174_RS06225 (J9174_06225) 1210287..1210823 + 537 WP_210151727.1 GrpB family protein -
J9174_RS06230 (J9174_06230) 1210828..1211277 + 450 WP_233455643.1 GNAT family N-acetyltransferase -
J9174_RS06235 (J9174_06235) 1211279..1211479 + 201 WP_210151728.1 HAD family hydrolase -
J9174_RS06240 (J9174_06240) 1211642..1212109 + 468 WP_210151729.1 hypothetical protein -
J9174_RS06245 (J9174_06245) 1212207..1212575 + 369 WP_210151730.1 GntR family transcriptional regulator -
J9174_RS06250 (J9174_06250) 1212575..1213675 + 1101 WP_210151731.1 DUF1648 domain-containing protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(8-88)

Antitoxin

(1-69)


Sequences


Toxin        


Download         Length: 91 a.a.        Molecular weight: 10698.44 Da        Isoelectric Point: 9.7524

>T198967 WP_164953490.1 NZ_CP072837:c1209765-1209493 [Macrococcus canis]
MTKKKILFYSSGFEDYTYWQTNDKTVLKKINKLIKSIMIDGANEGIGKPEKLLGNYTGCYSRRITHEHRLVYKIEDDSIC
ILQCRFHYKR

Download         Length: 273 bp

>T198967 NZ_CP097076:c4675078-4674794 [Klebsiella pneumoniae]
ATGACCTATGAACTGGAGTTTGATCCACGAGCCAGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGACCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGCGAATAAACGGCTCTAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 9737.75 Da        Isoelectric Point: 4.0808

>AT198967 WP_210151726.1 NZ_CP072837:c1210015-1209758 [Macrococcus canis]
MKVTTYSNARSNFRKIIDIVNEDSEPYTITTNTHNAVILSEQDYNSMIETLYLQSTPANAERLQKAIDESIDKNNLLQVE
IDLDD

Download         Length: 258 bp

>AT198967 NZ_CP097076:c4675310-4675068 [Klebsiella pneumoniae]
ATGGCCACGCTCAATGTTCGACTGGACGATAAACTCAAAAAAGAGGCTTATGCCGTGCTGGAGAAACTCGATATGACACC
AACGGAGGCGGTACGCCTGCTGTTTCAATACATTGCGGAAAATGGCCGCATGCCGGTGAAAAGTATGACCATCAGTGATG
GCGAAGCGGCGTTATTACGCACCGTTCGCGAACGGCTGGAAAACCCACGGCCAGGGGTTAAGGTGAGTCTGGATGACCTA
TGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure

References