Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 1949959..1950658 Replicon chromosome
Accession NZ_CP072167
Organism Agrobacterium larrymoorei strain AF3.44

Toxin (Protein)


Gene name mqsR Uniprot ID A0A4D7DRI6
Locus tag J5285_RS09230 Protein ID WP_027675444.1
Coordinates 1950362..1950658 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID A0A4D7DPV9
Locus tag J5285_RS09225 Protein ID WP_027675445.1
Coordinates 1949959..1950360 (-) Length 134 a.a.

Genomic Context

J5285_RS09210J5285_RS09215J5285_RS09220J5285_RS09240J5285_RS09245J5285_RS09250J5285_RS09205J5285_RS09225J5285_RS09230J5285_RS09235J5285_RS09255J5285_RS09260
Location: 1946760..1948424 (1665 bp)
Type: Others
Protein ID: WP_027675448.1
Location: 1948456..1948959 (504 bp)
Type: Others
Protein ID: WP_051441274.1
Location: 1949115..1949861 (747 bp)
Type: Others
Protein ID: WP_027675446.1
Location: 1951918..1952316 (399 bp)
Type: Others
Protein ID: WP_027675442.1
Location: 1952313..1953710 (1398 bp)
Type: Others
Protein ID: WP_027675441.1
Location: 1953839..1954675 (837 bp)
Type: Others
Protein ID: WP_027675440.1
Location: 1945055..1946449 (1395 bp)
Type: Others
Protein ID: WP_027675449.1
Location: 1949959..1950360 (402 bp)
Type: Antitoxin
Protein ID: WP_027675445.1
Location: 1950362..1950658 (297 bp)
Type: Toxin
Protein ID: WP_027675444.1
Location: 1950764..1951780 (1017 bp)
Type: Others
Protein ID: WP_027675443.1
Location: 1954775..1955056 (282 bp)
Type: Others
Protein ID: WP_027675439.1
Location: 1955053..1955382 (330 bp)
Type: Others
Protein ID: WP_037170972.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
J5285_RS09205 (J5285_09210)1945055..1946449-1395WP_027675449.1FAD-binding oxidoreductase-
J5285_RS09210 (J5285_09215)1946760..1948424+1665WP_027675448.1electron transfer flavoprotein-ubiquinone oxidoreductase-
J5285_RS09215 (J5285_09220)1948456..1948959+504WP_051441274.1GNAT family N-acetyltransferase-
J5285_RS09220 (J5285_09225)1949115..1949861+747WP_027675446.1pentapeptide repeat-containing protein-
J5285_RS09225 (J5285_09230)1949959..1950360-402WP_027675445.1type II toxin-antitoxin system MqsA family antitoxinAntitoxin
J5285_RS09230 (J5285_09235)1950362..1950658-297WP_027675444.1type II toxin-antitoxin system MqsR family toxinToxin
J5285_RS09235 (J5285_09240)1950764..1951780-1017WP_027675443.1zinc-binding alcohol dehydrogenase family protein-
J5285_RS09240 (J5285_09245)1951918..1952316+399WP_027675442.1helix-turn-helix domain-containing protein-
J5285_RS09245 (J5285_09250)1952313..1953710+1398WP_027675441.1coniferyl aldehyde dehydrogenase-
J5285_RS09250 (J5285_09255)1953839..1954675+837WP_027675440.1undecaprenyl-diphosphate phosphatase-
J5285_RS09255 (J5285_09260)1954775..1955056-282WP_027675439.1XRE family transcriptional regulator-
J5285_RS09260 (J5285_09265)1955053..1955382-330WP_037170972.1type II toxin-antitoxin system RelE/ParE family toxin-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(2-97)

Antitoxin

Antitoxin MqsA

(3-130)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11165.86 Da        Isoelectric Point: 6.9886

>T197452 WP_027675444.1 NZ_CP072167:c1950658-1950362 [Agrobacterium larrymoorei]
MEKTAPHTVLEDVWRLLDEGKVRETFSALSGAAALGMSRSDMHDVVRALSLKDFFKSMTAYHDENVWHDVYKPVTPFGHL
YVKLIVSNNVLIVSFKEK

Download         Length: 297 bp

>T197452 NZ_CP096187:1711695-1712216 [Enterobacter roggenkampii]
GTGGACAATCTCACGATCGAAATGTTTTCAGAGGGAAAAGACTATGATTTCAGGGACTTCGATTGTGGTGAACCCTCGCT
AAATGTCTTCCTCACAGAACATCTGGTGCGTCAGCACAATGGGCGTATTTTACGAGGCTATTTGCTTAAAGATCGCGATG
GTCCGCGAGTCCTGGGCTATTACACGTTGTCTGGTAGTTGCTTTGAAAAAGCGATGCTGCCTTCTAAGACTCAGCAGCGT
CGGATCCCTTATAGCAACGTACCGAGCGTAACGCTGGGACGTCTGGCGATACATAAAGACTTACAGGGGCTGGAGTGGGG
AACGACGCTCGTCACGCATGCCATGCGGGTTGTCTATCTGGCATCGCAGGCGGTGGGCGTACACGGAATATTTGTTGATG
CACTCAACGACCAGGCAAAACAATTTTATCTGAAGCAGGGCTTTATTCCGCTGACGGATGAAAACAGCCATTCTCTTTTC
TTTCCTACAAAATCTATCGAACGACTGTTTGAGCAGGCGTGA

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14521.51 Da        Isoelectric Point: 5.2501

>AT197452 WP_027675445.1 NZ_CP072167:c1950360-1949959 [Agrobacterium larrymoorei]
MACPICGADAVTKETRDLEYSYKGQVTTIPHVTGTFCSACGEAILEGEESERVSAAMLAFNRQVNASFVDPEFIATVRKK
LSLDQREAGDLFGGGVNAFSRYENGKSRPPRSLIQLLKILEKHPDLLDEIKAA

Download         Length: 402 bp

>AT197452 NZ_CP096187:1711419-1711688 [Enterobacter roggenkampii]
ATGCCAGCACTGAAAAAACAGCGTATCGATCTTCGCTTAACGGACGAAGACAAAACAATGATTGAAGAAGCGGCAGCGAT
GACGAACCAAACGATCACCCAGTTTATGGTGAACAGTGCGTCAGAGCGGGCAGCGGAAGTTATCGAGCAGCACCGCCGTC
TCGTATTAAACGAAGCATCATGGAATGCCGTGATGGATGCCATCGAGAATCCGCCAGAGCCAAATGAACGCCTGAAGCGA
GCGGCGAAACGTCTTCGAAACATGGAGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
AlphaFold DBA0A4D7DRI6

Antitoxin

Loading, please wait
Source
ID
Structure
AlphaFold DBA0A4D7DPV9

References