Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | SprA2-SprA2AS/- |
Location | 2367444..2367628 | Replicon | chromosome |
Accession | NZ_CP071104 | ||
Organism | Staphylococcus aureus strain PS/BAC/317/16/W |
Toxin (Protein)
Gene name | SprA2 | Uniprot ID | A0A2P7CQJ7 |
Locus tag | JYA73_RS11515 | Protein ID | WP_000482647.1 |
Coordinates | 2367521..2367628 (-) | Length | 36 a.a. |
Antitoxin (RNA)
Gene name | SprA2AS | ||
Locus tag | - | ||
Coordinates | 2367444..2367504 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JYA73_RS11500 (JYA73_002303) | 2362954..2363121 | - | 168 | Protein_2233 | hypothetical protein | - |
JYA73_RS11505 (JYA73_002304) | 2363352..2365085 | - | 1734 | WP_000486505.1 | ABC transporter ATP-binding protein | - |
JYA73_RS11510 (JYA73_002305) | 2365110..2366873 | - | 1764 | WP_001064829.1 | ABC transporter ATP-binding protein | - |
- | 2367444..2367504 | + | 61 | - | - | Antitoxin |
JYA73_RS11515 (JYA73_002306) | 2367521..2367628 | - | 108 | WP_000482647.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
JYA73_RS11520 (JYA73_002307) | 2367762..2368148 | - | 387 | WP_000779351.1 | flippase GtxA | - |
JYA73_RS11525 (JYA73_002308) | 2368416..2369558 | + | 1143 | WP_001176855.1 | glycerate kinase | - |
JYA73_RS11530 (JYA73_002309) | 2369618..2370277 | + | 660 | WP_211021896.1 | hypothetical protein | - |
JYA73_RS11535 (JYA73_002310) | 2370459..2371670 | + | 1212 | WP_001191919.1 | multidrug effflux MFS transporter | - |
JYA73_RS11540 (JYA73_002311) | 2371793..2372266 | - | 474 | WP_000456496.1 | GyrI-like domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 36 a.a. Molecular weight: 4012.76 Da Isoelectric Point: 10.4935
>T195326 WP_000482647.1 NZ_CP071104:c2367628-2367521 [Staphylococcus aureus]
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
Download Length: 108 bp
>T195326 NZ_CP094532:c1273194-1272910 [Chryseobacterium suipulveris]
ATGGATATTTCAAAATTTGACATTGCAGATTATTTGGACAGCAACGAAATGATTGCTGAATATCTTAATGTTGTCCTTGA
AGAAGGCGATGATTCTGAAATTGTTGTAGCAATTGGTAATATTGCAAAAGCAATCGGAATGACAAAAATTGCAGAAGAAA
CAGGAATGAGCAGACCGAGTTTGTACAAAGCACTTTCTGAAGGTGCAAAACCACAGTTTTCAACAATTATGAAAGTTTTG
AAAGCAGTTGGCGGACAAATAAGAGTTAATCCTATAACTGCATAA
ATGGATATTTCAAAATTTGACATTGCAGATTATTTGGACAGCAACGAAATGATTGCTGAATATCTTAATGTTGTCCTTGA
AGAAGGCGATGATTCTGAAATTGTTGTAGCAATTGGTAATATTGCAAAAGCAATCGGAATGACAAAAATTGCAGAAGAAA
CAGGAATGAGCAGACCGAGTTTGTACAAAGCACTTTCTGAAGGTGCAAAACCACAGTTTTCAACAATTATGAAAGTTTTG
AAAGCAGTTGGCGGACAAATAAGAGTTAATCCTATAACTGCATAA
Antitoxin
Download Length: 61 bp
>AT195326 NZ_CP071104:2367444-2367504 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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